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LINC01782 (long intergenic non-protein coding RNA 1782)

Identity

Other alias-
HGNC (Hugo) LINC01782
LocusID (NCBI) 101927411
Atlas_Id 78820
Location 19q13.11  [Link to chromosome band 19q13]
Location_base_pair Starts at 32102091 and ends at 32105916 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01782   52572
Cards
Entrez_Gene (NCBI)LINC01782  101927411  long intergenic non-protein coding RNA 1782
Aliases
GeneCards (Weizmann)LINC01782
Ensembl hg19 (Hinxton)ENSG00000267204 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000267204 [Gene_View]  chr19:32102091-32105916 [Contig_View]  LINC01782 [Vega]
ICGC DataPortalENSG00000267204
TCGA cBioPortalLINC01782
AceView (NCBI)LINC01782
Genatlas (Paris)LINC01782
WikiGenes101927411
SOURCE (Princeton)LINC01782
Genetics Home Reference (NIH)LINC01782
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01782  -     chr19:32102091-32105916 -  19q13.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01782  -     19q13.11   [Description]    (hg19-Feb_2009)
EnsemblLINC01782 - 19q13.11 [CytoView hg19]  LINC01782 - 19q13.11 [CytoView hg38]
Mapping of homologs : NCBILINC01782 [Mapview hg19]  LINC01782 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC033328
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01782
Cluster EST : UnigeneHs.515337 [ NCBI ]
CGAP (NCI)Hs.515337
Alternative Splicing GalleryENSG00000267204
Gene ExpressionLINC01782 [ NCBI-GEO ]   LINC01782 [ EBI - ARRAY_EXPRESS ]   LINC01782 [ SEEK ]   LINC01782 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01782 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927411
GTEX Portal (Tissue expression)LINC01782
Human Protein AtlasENSG00000267204-LINC01782 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01782
DMDM Disease mutations101927411
Blocks (Seattle)LINC01782
Human Protein Atlas [tissue]ENSG00000267204-LINC01782 [tissue]
Protein Interaction databases
FunCoupENSG00000267204
BioGRIDLINC01782
STRING (EMBL)LINC01782
ZODIACLINC01782
Ontologies - Pathways
Huge Navigator LINC01782 [HugePedia]
snp3D : Map Gene to Disease101927411
BioCentury BCIQLINC01782
ClinGenLINC01782
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927411
Clinical trialLINC01782
Miscellaneous
canSAR (ICR)LINC01782 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01782
EVEXLINC01782
GoPubMedLINC01782
iHOPLINC01782
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:38:56 CET 2017

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