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LINC01783 (long intergenic non-protein coding RNA 1783)

Identity

Other alias-
HGNC (Hugo) LINC01783
LocusID (NCBI) 100132147
Atlas_Id 79211
Location 1p36.13  [Link to chromosome band 1p36]
Location_base_pair Starts at 16533891 and ends at 16535652 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01783   52573
Cards
Entrez_Gene (NCBI)LINC01783  100132147  long intergenic non-protein coding RNA 1783
Aliases
GeneCards (Weizmann)LINC01783
Ensembl hg19 (Hinxton)ENSG00000233421 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233421 [Gene_View]  chr1:16533891-16535652 [Contig_View]  LINC01783 [Vega]
ICGC DataPortalENSG00000233421
TCGA cBioPortalLINC01783
AceView (NCBI)LINC01783
Genatlas (Paris)LINC01783
WikiGenes100132147
SOURCE (Princeton)LINC01783
Genetics Home Reference (NIH)LINC01783
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01783  -     chr1:16533891-16535652 -  1p36.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01783  -     1p36.13   [Description]    (hg19-Feb_2009)
EnsemblLINC01783 - 1p36.13 [CytoView hg19]  LINC01783 - 1p36.13 [CytoView hg38]
Mapping of homologs : NCBILINC01783 [Mapview hg19]  LINC01783 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC036435 HY209018
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01783
Cluster EST : UnigeneHs.742204 [ NCBI ]
CGAP (NCI)Hs.742204
Alternative Splicing GalleryENSG00000233421
Gene ExpressionLINC01783 [ NCBI-GEO ]   LINC01783 [ EBI - ARRAY_EXPRESS ]   LINC01783 [ SEEK ]   LINC01783 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01783 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100132147
GTEX Portal (Tissue expression)LINC01783
Human Protein AtlasENSG00000233421-LINC01783 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01783
DMDM Disease mutations100132147
Blocks (Seattle)LINC01783
Human Protein Atlas [tissue]ENSG00000233421-LINC01783 [tissue]
IPIIPI00847224   
Protein Interaction databases
FunCoupENSG00000233421
BioGRIDLINC01783
STRING (EMBL)LINC01783
ZODIACLINC01783
Ontologies - Pathways
Huge Navigator LINC01783 [HugePedia]
snp3D : Map Gene to Disease100132147
BioCentury BCIQLINC01783
ClinGenLINC01783
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100132147
Clinical trialLINC01783
Miscellaneous
canSAR (ICR)LINC01783 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01783
EVEXLINC01783
GoPubMedLINC01783
iHOPLINC01783
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:40:10 CET 2017

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