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LINC01792 (long intergenic non-protein coding RNA 1792)

Identity

Other alias-
HGNC (Hugo) LINC01792
LocusID (NCBI) 100507140
Atlas_Id 79090
Location 2q33.1  [Link to chromosome band 2q33]
Location_base_pair Starts at 200712305 and ends at 200735177 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01792   52582
Cards
Entrez_Gene (NCBI)LINC01792  100507140  long intergenic non-protein coding RNA 1792
Aliases
GeneCards (Weizmann)LINC01792
Ensembl hg19 (Hinxton)ENSG00000237166 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237166 [Gene_View]  chr2:200712305-200735177 [Contig_View]  LINC01792 [Vega]
ICGC DataPortalENSG00000237166
TCGA cBioPortalLINC01792
AceView (NCBI)LINC01792
Genatlas (Paris)LINC01792
WikiGenes100507140
SOURCE (Princeton)LINC01792
Genetics Home Reference (NIH)LINC01792
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01792  -     chr2:200712305-200735177 -  2q33.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01792  -     2q33.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01792 - 2q33.1 [CytoView hg19]  LINC01792 - 2q33.1 [CytoView hg38]
Mapping of homologs : NCBILINC01792 [Mapview hg19]  LINC01792 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC031274 BC047410
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01792
Cluster EST : UnigeneHs.382116 [ NCBI ]
CGAP (NCI)Hs.382116
Alternative Splicing GalleryENSG00000237166
Gene ExpressionLINC01792 [ NCBI-GEO ]   LINC01792 [ EBI - ARRAY_EXPRESS ]   LINC01792 [ SEEK ]   LINC01792 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01792 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507140
GTEX Portal (Tissue expression)LINC01792
Human Protein AtlasENSG00000237166-LINC01792 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01792
DMDM Disease mutations100507140
Blocks (Seattle)LINC01792
Human Protein Atlas [tissue]ENSG00000237166-LINC01792 [tissue]
Protein Interaction databases
FunCoupENSG00000237166
BioGRIDLINC01792
STRING (EMBL)LINC01792
ZODIACLINC01792
Ontologies - Pathways
Huge Navigator LINC01792 [HugePedia]
snp3D : Map Gene to Disease100507140
BioCentury BCIQLINC01792
ClinGenLINC01792
Chemical/Protein Interactions : CTD100507140
Clinical trialLINC01792
Miscellaneous
canSAR (ICR)LINC01792 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01792
EVEXLINC01792
GoPubMedLINC01792
iHOPLINC01792
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:05 CET 2017

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