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LINC01793 (long intergenic non-protein coding RNA 1793)

Identity

Other alias-
HGNC (Hugo) LINC01793
LocusID (NCBI) 101927285
Atlas_Id 80135
Location 2p16.1  [Link to chromosome band 2p16]
Location_base_pair Starts at 59217708 and ends at 59279400 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01793   52583
Cards
Entrez_Gene (NCBI)LINC01793  101927285  long intergenic non-protein coding RNA 1793
Aliases
GeneCards (Weizmann)LINC01793
Ensembl hg19 (Hinxton)ENSG00000222030 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000222030 [Gene_View]  chr2:59217708-59279400 [Contig_View]  LINC01793 [Vega]
ICGC DataPortalENSG00000222030
TCGA cBioPortalLINC01793
AceView (NCBI)LINC01793
Genatlas (Paris)LINC01793
WikiGenes101927285
SOURCE (Princeton)LINC01793
Genetics Home Reference (NIH)LINC01793
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01793  -     chr2:59217708-59279400 +  2p16.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01793  -     2p16.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01793 - 2p16.1 [CytoView hg19]  LINC01793 - 2p16.1 [CytoView hg38]
Mapping of homologs : NCBILINC01793 [Mapview hg19]  LINC01793 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056269
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01793
Cluster EST : UnigeneHs.570209 [ NCBI ]
CGAP (NCI)Hs.570209
Alternative Splicing GalleryENSG00000222030
Gene ExpressionLINC01793 [ NCBI-GEO ]   LINC01793 [ EBI - ARRAY_EXPRESS ]   LINC01793 [ SEEK ]   LINC01793 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01793 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927285
GTEX Portal (Tissue expression)LINC01793
Human Protein AtlasENSG00000222030-LINC01793 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01793
DMDM Disease mutations101927285
Blocks (Seattle)LINC01793
Human Protein Atlas [tissue]ENSG00000222030-LINC01793 [tissue]
Protein Interaction databases
FunCoupENSG00000222030
BioGRIDLINC01793
STRING (EMBL)LINC01793
ZODIACLINC01793
Ontologies - Pathways
Huge Navigator LINC01793 [HugePedia]
snp3D : Map Gene to Disease101927285
BioCentury BCIQLINC01793
ClinGenLINC01793
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927285
Clinical trialLINC01793
Miscellaneous
canSAR (ICR)LINC01793 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01793
EVEXLINC01793
GoPubMedLINC01793
iHOPLINC01793
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:05 CET 2017

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