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LINC01795 (long intergenic non-protein coding RNA 1795)

Identity

Other alias-
HGNC (Hugo) LINC01795
LocusID (NCBI) 105374744
Atlas_Id 79571
Location 2p16.1  [Link to chromosome band 2p16]
Location_base_pair Starts at 58275877 and ends at 58296548 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01795   52585
Cards
Entrez_Gene (NCBI)LINC01795  105374744  long intergenic non-protein coding RNA 1795
Aliases
GeneCards (Weizmann)LINC01795
Ensembl hg19 (Hinxton)ENSG00000225226 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225226 [Gene_View]  chr2:58275877-58296548 [Contig_View]  LINC01795 [Vega]
ICGC DataPortalENSG00000225226
TCGA cBioPortalLINC01795
AceView (NCBI)LINC01795
Genatlas (Paris)LINC01795
WikiGenes105374744
SOURCE (Princeton)LINC01795
Genetics Home Reference (NIH)LINC01795
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01795  -     chr2:58275877-58296548 +  2p16.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01795  -     2p16.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01795 - 2p16.1 [CytoView hg19]  LINC01795 - 2p16.1 [CytoView hg38]
Mapping of homologs : NCBILINC01795 [Mapview hg19]  LINC01795 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BI825310
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01795
Cluster EST : UnigeneHs.447687 [ NCBI ]
CGAP (NCI)Hs.447687
Alternative Splicing GalleryENSG00000225226
Gene ExpressionLINC01795 [ NCBI-GEO ]   LINC01795 [ EBI - ARRAY_EXPRESS ]   LINC01795 [ SEEK ]   LINC01795 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01795 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105374744
GTEX Portal (Tissue expression)LINC01795
Human Protein AtlasENSG00000225226-LINC01795 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01795
DMDM Disease mutations105374744
Blocks (Seattle)LINC01795
Human Protein Atlas [tissue]ENSG00000225226-LINC01795 [tissue]
Protein Interaction databases
FunCoupENSG00000225226
BioGRIDLINC01795
STRING (EMBL)LINC01795
ZODIACLINC01795
Ontologies - Pathways
Huge Navigator LINC01795 [HugePedia]
snp3D : Map Gene to Disease105374744
BioCentury BCIQLINC01795
ClinGenLINC01795
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105374744
Clinical trialLINC01795
Miscellaneous
canSAR (ICR)LINC01795 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01795
EVEXLINC01795
GoPubMedLINC01795
iHOPLINC01795
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:05 CET 2017

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