Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LINC01796 (long intergenic non-protein coding RNA 1796)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC01796
LocusID (NCBI) 105373518
Atlas_Id 79196
Location 2q12.1  [Link to chromosome band 2q12]
Location_base_pair Starts at 102873339 and ends at 102895722 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC01796   52586
Cards
Entrez_Gene (NCBI)LINC01796    long intergenic non-protein coding RNA 1796
Aliases
GeneCards (Weizmann)LINC01796
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr2:102873339-102895722 [Contig_View]  LINC01796 [Vega]
TCGA cBioPortalLINC01796
AceView (NCBI)LINC01796
Genatlas (Paris)LINC01796
SOURCE (Princeton)LINC01796
Genetics Home Reference (NIH)LINC01796
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01796  -     chr2:102873339-102895722 -  2q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01796  -     2q12.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC01796 - 2q12.1 [CytoView hg19]  LINC01796 - 2q12.1 [CytoView hg38]
Genome Data Viewer NCBILINC01796 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BX090679
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01796
Gene ExpressionLINC01796 [ NCBI-GEO ]   LINC01796 [ EBI - ARRAY_EXPRESS ]   LINC01796 [ SEEK ]   LINC01796 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01796 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01796 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)105373518
GTEX Portal (Tissue expression)LINC01796
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01796
Protein Interaction databases
BioGRIDLINC01796
STRING (EMBL)LINC01796
ZODIACLINC01796
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC01796
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:58:46 CEST 2021

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