Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC01797 (long intergenic non-protein coding RNA 1797)


Alias (NCBI)-
HGNC (Hugo) LINC01797
LocusID (NCBI) 101927577
Atlas_Id 79107
Location 2p14  [Link to chromosome band 2p14]
Location_base_pair Starts at 66697030 and ends at 66703227 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC01797   52587
Entrez_Gene (NCBI)LINC01797    long intergenic non-protein coding RNA 1797
GeneCards (Weizmann)LINC01797
Ensembl hg19 (Hinxton)ENSG00000237179 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237179 [Gene_View]  ENSG00000237179 [Sequence]  chr2:66697030-66703227 [Contig_View]  LINC01797 [Vega]
ICGC DataPortalENSG00000237179
TCGA cBioPortalLINC01797
AceView (NCBI)LINC01797
Genatlas (Paris)LINC01797
SOURCE (Princeton)LINC01797
Genetics Home Reference (NIH)LINC01797
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01797  -     chr2:66697030-66703227 -  2p14   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01797  -     2p14   [Description]    (hg19-Feb_2009)
GoldenPathLINC01797 - 2p14 [CytoView hg19]  LINC01797 - 2p14 [CytoView hg38]
genome Data Viewer NCBILINC01797 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)CD557966 HY009512
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01797
Alternative Splicing GalleryENSG00000237179
Gene ExpressionLINC01797 [ NCBI-GEO ]   LINC01797 [ EBI - ARRAY_EXPRESS ]   LINC01797 [ SEEK ]   LINC01797 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01797 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01797 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101927577
GTEX Portal (Tissue expression)LINC01797
Human Protein AtlasENSG00000237179-LINC01797 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01797
Blocks (Seattle)LINC01797
Human Protein Atlas [tissue]ENSG00000237179-LINC01797 [tissue]
Protein Interaction databases
Ontologies - Pathways
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:03:21 CET 2020

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