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LINC01799 (long intergenic non-protein coding RNA 1799)

Identity

Other alias-
HGNC (Hugo) LINC01799
LocusID (NCBI) 101060019
Atlas_Id 79748
Location 2p14  [Link to chromosome band 2p14]
Location_base_pair Starts at 66904436 and ends at 66971466 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01799   52589
Cards
Entrez_Gene (NCBI)LINC01799  101060019  long intergenic non-protein coding RNA 1799
Aliases
GeneCards (Weizmann)LINC01799
Ensembl hg19 (Hinxton)ENSG00000230525 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230525 [Gene_View]  chr2:66904436-66971466 [Contig_View]  LINC01799 [Vega]
ICGC DataPortalENSG00000230525
TCGA cBioPortalLINC01799
AceView (NCBI)LINC01799
Genatlas (Paris)LINC01799
WikiGenes101060019
SOURCE (Princeton)LINC01799
Genetics Home Reference (NIH)LINC01799
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01799  -     chr2:66904436-66971466 +  2p14   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01799  -     2p14   [Description]    (hg19-Feb_2009)
EnsemblLINC01799 - 2p14 [CytoView hg19]  LINC01799 - 2p14 [CytoView hg38]
Mapping of homologs : NCBILINC01799 [Mapview hg19]  LINC01799 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW241980 BX103005
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01799
Cluster EST : UnigeneHs.116425 [ NCBI ]
CGAP (NCI)Hs.116425
Alternative Splicing GalleryENSG00000230525
Gene ExpressionLINC01799 [ NCBI-GEO ]   LINC01799 [ EBI - ARRAY_EXPRESS ]   LINC01799 [ SEEK ]   LINC01799 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01799 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101060019
GTEX Portal (Tissue expression)LINC01799
Human Protein AtlasENSG00000230525-LINC01799 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01799
DMDM Disease mutations101060019
Blocks (Seattle)LINC01799
Human Protein Atlas [tissue]ENSG00000230525-LINC01799 [tissue]
Protein Interaction databases
FunCoupENSG00000230525
BioGRIDLINC01799
STRING (EMBL)LINC01799
ZODIACLINC01799
Ontologies - Pathways
Huge Navigator LINC01799 [HugePedia]
snp3D : Map Gene to Disease101060019
BioCentury BCIQLINC01799
ClinGenLINC01799
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101060019
Clinical trialLINC01799
Miscellaneous
canSAR (ICR)LINC01799 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01799
EVEXLINC01799
GoPubMedLINC01799
iHOPLINC01799
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:06 CET 2017

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