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LINC01802 (long intergenic non-protein coding RNA 1802)

Identity

Other alias-
HGNC (Hugo) LINC01802
LocusID (NCBI) 105373852
Atlas_Id 79281
Location 2q33.3  [Link to chromosome band 2q33]
Location_base_pair Starts at 207260445 and ends at 207271064 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01802   52591
Cards
Entrez_Gene (NCBI)LINC01802  105373852  long intergenic non-protein coding RNA 1802
Aliases
GeneCards (Weizmann)LINC01802
Ensembl hg19 (Hinxton)ENSG00000225064 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225064 [Gene_View]  chr2:207260445-207271064 [Contig_View]  LINC01802 [Vega]
ICGC DataPortalENSG00000225064
TCGA cBioPortalLINC01802
AceView (NCBI)LINC01802
Genatlas (Paris)LINC01802
WikiGenes105373852
SOURCE (Princeton)LINC01802
Genetics Home Reference (NIH)LINC01802
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01802  -     chr2:207260445-207271064 +  2q33.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01802  -     2q33.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01802 - 2q33.3 [CytoView hg19]  LINC01802 - 2q33.3 [CytoView hg38]
Mapping of homologs : NCBILINC01802 [Mapview hg19]  LINC01802 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI765208 AI769396 BX089370
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01802
Cluster EST : UnigeneHs.735560 [ NCBI ]
CGAP (NCI)Hs.735560
Alternative Splicing GalleryENSG00000225064
Gene ExpressionLINC01802 [ NCBI-GEO ]   LINC01802 [ EBI - ARRAY_EXPRESS ]   LINC01802 [ SEEK ]   LINC01802 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01802 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105373852
GTEX Portal (Tissue expression)LINC01802
Human Protein AtlasENSG00000225064-LINC01802 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01802
DMDM Disease mutations105373852
Blocks (Seattle)LINC01802
Human Protein Atlas [tissue]ENSG00000225064-LINC01802 [tissue]
Protein Interaction databases
FunCoupENSG00000225064
BioGRIDLINC01802
STRING (EMBL)LINC01802
ZODIACLINC01802
Ontologies - Pathways
Huge Navigator LINC01802 [HugePedia]
snp3D : Map Gene to Disease105373852
BioCentury BCIQLINC01802
ClinGenLINC01802
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105373852
Clinical trialLINC01802
Miscellaneous
canSAR (ICR)LINC01802 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01802
EVEXLINC01802
GoPubMedLINC01802
iHOPLINC01802
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:07 CET 2017

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