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LINC01804 (long intergenic non-protein coding RNA 1804)

Identity

Other alias-
HGNC (Hugo) LINC01804
LocusID (NCBI) 101926966
Atlas_Id 80097
Location 2p24.3  [Link to chromosome band 2p24]
Location_base_pair Starts at 15690782 and ends at 15718961 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01804   52596
Cards
Entrez_Gene (NCBI)LINC01804  101926966  long intergenic non-protein coding RNA 1804
Aliases
GeneCards (Weizmann)LINC01804
Ensembl hg19 (Hinxton)ENSG00000231031 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231031 [Gene_View]  chr2:15690782-15718961 [Contig_View]  LINC01804 [Vega]
ICGC DataPortalENSG00000231031
TCGA cBioPortalLINC01804
AceView (NCBI)LINC01804
Genatlas (Paris)LINC01804
WikiGenes101926966
SOURCE (Princeton)LINC01804
Genetics Home Reference (NIH)LINC01804
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01804  -     chr2:15690782-15718961 +  2p24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01804  -     2p24.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01804 - 2p24.3 [CytoView hg19]  LINC01804 - 2p24.3 [CytoView hg38]
Mapping of homologs : NCBILINC01804 [Mapview hg19]  LINC01804 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093525
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01804
Cluster EST : UnigeneHs.502835 [ NCBI ]
CGAP (NCI)Hs.502835
Alternative Splicing GalleryENSG00000231031
Gene ExpressionLINC01804 [ NCBI-GEO ]   LINC01804 [ EBI - ARRAY_EXPRESS ]   LINC01804 [ SEEK ]   LINC01804 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01804 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101926966
GTEX Portal (Tissue expression)LINC01804
Human Protein AtlasENSG00000231031-LINC01804 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01804
DMDM Disease mutations101926966
Blocks (Seattle)LINC01804
Human Protein Atlas [tissue]ENSG00000231031-LINC01804 [tissue]
Protein Interaction databases
FunCoupENSG00000231031
BioGRIDLINC01804
STRING (EMBL)LINC01804
ZODIACLINC01804
Ontologies - Pathways
Huge Navigator LINC01804 [HugePedia]
snp3D : Map Gene to Disease101926966
BioCentury BCIQLINC01804
ClinGenLINC01804
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101926966
Clinical trialLINC01804
Miscellaneous
canSAR (ICR)LINC01804 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01804
EVEXLINC01804
GoPubMedLINC01804
iHOPLINC01804
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:07 CET 2017

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