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LINC01805 (long intergenic non-protein coding RNA 1805)

Identity

Other alias-
HGNC (Hugo) LINC01805
LocusID (NCBI) 105374774
Atlas_Id 79058
Location 2p14  [Link to chromosome band 2p14]
Location_base_pair Starts at 64486353 and ends at 64500904 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01805   52597
Cards
Entrez_Gene (NCBI)LINC01805  105374774  long intergenic non-protein coding RNA 1805
Aliases
GeneCards (Weizmann)LINC01805
Ensembl hg19 (Hinxton)ENSG00000223863 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223863 [Gene_View]  chr2:64486353-64500904 [Contig_View]  LINC01805 [Vega]
ICGC DataPortalENSG00000223863
TCGA cBioPortalLINC01805
AceView (NCBI)LINC01805
Genatlas (Paris)LINC01805
WikiGenes105374774
SOURCE (Princeton)LINC01805
Genetics Home Reference (NIH)LINC01805
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01805  -     chr2:64486353-64500904 +  2p14   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01805  -     2p14   [Description]    (hg19-Feb_2009)
EnsemblLINC01805 - 2p14 [CytoView hg19]  LINC01805 - 2p14 [CytoView hg38]
Mapping of homologs : NCBILINC01805 [Mapview hg19]  LINC01805 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01805
Alternative Splicing GalleryENSG00000223863
Gene ExpressionLINC01805 [ NCBI-GEO ]   LINC01805 [ EBI - ARRAY_EXPRESS ]   LINC01805 [ SEEK ]   LINC01805 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01805 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105374774
GTEX Portal (Tissue expression)LINC01805
Human Protein AtlasENSG00000223863-LINC01805 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01805
DMDM Disease mutations105374774
Blocks (Seattle)LINC01805
Human Protein Atlas [tissue]ENSG00000223863-LINC01805 [tissue]
Protein Interaction databases
FunCoupENSG00000223863
BioGRIDLINC01805
STRING (EMBL)LINC01805
ZODIACLINC01805
Ontologies - Pathways
Huge Navigator LINC01805 [HugePedia]
snp3D : Map Gene to Disease105374774
BioCentury BCIQLINC01805
ClinGenLINC01805
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105374774
Clinical trialLINC01805
Miscellaneous
canSAR (ICR)LINC01805 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01805
EVEXLINC01805
GoPubMedLINC01805
iHOPLINC01805
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:07 CET 2017

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