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LINC01806 (long intergenic non-protein coding RNA 1806)

Identity

Other alias-
HGNC (Hugo) LINC01806
LocusID (NCBI) 100996579
Atlas_Id 79514
Location 2q24.2  [Link to chromosome band 2q24]
Location_base_pair Starts at 161244739 and ends at 161249050 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01806   52599
Cards
Entrez_Gene (NCBI)LINC01806  100996579  long intergenic non-protein coding RNA 1806
Aliases
GeneCards (Weizmann)LINC01806
Ensembl hg19 (Hinxton)ENSG00000227403 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227403 [Gene_View]  chr2:161244739-161249050 [Contig_View]  LINC01806 [Vega]
ICGC DataPortalENSG00000227403
TCGA cBioPortalLINC01806
AceView (NCBI)LINC01806
Genatlas (Paris)LINC01806
WikiGenes100996579
SOURCE (Princeton)LINC01806
Genetics Home Reference (NIH)LINC01806
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01806  -     chr2:161244739-161249050 +  2q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01806  -     2q24.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01806 - 2q24.2 [CytoView hg19]  LINC01806 - 2q24.2 [CytoView hg38]
Mapping of homologs : NCBILINC01806 [Mapview hg19]  LINC01806 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA828023 AK027541 BG697582
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01806
Cluster EST : UnigeneHs.733796 [ NCBI ]
CGAP (NCI)Hs.733796
Alternative Splicing GalleryENSG00000227403
Gene ExpressionLINC01806 [ NCBI-GEO ]   LINC01806 [ EBI - ARRAY_EXPRESS ]   LINC01806 [ SEEK ]   LINC01806 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01806 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100996579
GTEX Portal (Tissue expression)LINC01806
Human Protein AtlasENSG00000227403-LINC01806 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01806
DMDM Disease mutations100996579
Blocks (Seattle)LINC01806
Human Protein Atlas [tissue]ENSG00000227403-LINC01806 [tissue]
Protein Interaction databases
FunCoupENSG00000227403
BioGRIDLINC01806
STRING (EMBL)LINC01806
ZODIACLINC01806
Ontologies - Pathways
Huge Navigator LINC01806 [HugePedia]
snp3D : Map Gene to Disease100996579
BioCentury BCIQLINC01806
ClinGenLINC01806
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100996579
Clinical trialLINC01806
Miscellaneous
canSAR (ICR)LINC01806 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01806
EVEXLINC01806
GoPubMedLINC01806
iHOPLINC01806
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:08 CET 2017

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