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LINC01810 (long intergenic non-protein coding RNA 1810)

Identity

Other alias-
HGNC (Hugo) LINC01810
LocusID (NCBI) 105373400
Atlas_Id 79226
Location 2p25.2  [Link to chromosome band 2p25]
Location_base_pair Starts at 5810636 and ends at 5812596 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01810   52613
Cards
Entrez_Gene (NCBI)LINC01810  105373400  long intergenic non-protein coding RNA 1810
Aliases
GeneCards (Weizmann)LINC01810
Ensembl hg19 (Hinxton)ENSG00000237266 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237266 [Gene_View]  chr2:5810636-5812596 [Contig_View]  LINC01810 [Vega]
ICGC DataPortalENSG00000237266
TCGA cBioPortalLINC01810
AceView (NCBI)LINC01810
Genatlas (Paris)LINC01810
WikiGenes105373400
SOURCE (Princeton)LINC01810
Genetics Home Reference (NIH)LINC01810
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01810  -     chr2:5810636-5812596 -  2p25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01810  -     2p25.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01810 - 2p25.2 [CytoView hg19]  LINC01810 - 2p25.2 [CytoView hg38]
Mapping of homologs : NCBILINC01810 [Mapview hg19]  LINC01810 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA393541 AA435772
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01810
Cluster EST : UnigeneHs.97467 [ NCBI ]
CGAP (NCI)Hs.97467
Alternative Splicing GalleryENSG00000237266
Gene ExpressionLINC01810 [ NCBI-GEO ]   LINC01810 [ EBI - ARRAY_EXPRESS ]   LINC01810 [ SEEK ]   LINC01810 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01810 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105373400
GTEX Portal (Tissue expression)LINC01810
Human Protein AtlasENSG00000237266-LINC01810 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01810
DMDM Disease mutations105373400
Blocks (Seattle)LINC01810
Human Protein Atlas [tissue]ENSG00000237266-LINC01810 [tissue]
Protein Interaction databases
FunCoupENSG00000237266
BioGRIDLINC01810
STRING (EMBL)LINC01810
ZODIACLINC01810
Ontologies - Pathways
Huge Navigator LINC01810 [HugePedia]
snp3D : Map Gene to Disease105373400
BioCentury BCIQLINC01810
ClinGenLINC01810
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105373400
Clinical trialLINC01810
Miscellaneous
canSAR (ICR)LINC01810 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01810
EVEXLINC01810
GoPubMedLINC01810
iHOPLINC01810
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:40:15 CET 2017

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