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LINC01813 (long intergenic non-protein coding RNA 1813)

Identity

Other alias-
HGNC (Hugo) LINC01813
LocusID (NCBI) 101927165
Atlas_Id 79421
Location 2p16.1  [Link to chromosome band 2p16]
Location_base_pair Starts at 56074654 and ends at 56090382 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01813   52617
Cards
Entrez_Gene (NCBI)LINC01813  101927165  long intergenic non-protein coding RNA 1813
Aliases
GeneCards (Weizmann)LINC01813
Ensembl hg19 (Hinxton)ENSG00000229805 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229805 [Gene_View]  chr2:56074654-56090382 [Contig_View]  LINC01813 [Vega]
ICGC DataPortalENSG00000229805
TCGA cBioPortalLINC01813
AceView (NCBI)LINC01813
Genatlas (Paris)LINC01813
WikiGenes101927165
SOURCE (Princeton)LINC01813
Genetics Home Reference (NIH)LINC01813
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01813  -     chr2:56074654-56090382 -  2p16.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01813  -     2p16.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01813 - 2p16.1 [CytoView hg19]  LINC01813 - 2p16.1 [CytoView hg38]
Mapping of homologs : NCBILINC01813 [Mapview hg19]  LINC01813 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC040311 DB084887
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01813
Cluster EST : UnigeneHs.679803 [ NCBI ]
CGAP (NCI)Hs.679803
Alternative Splicing GalleryENSG00000229805
Gene ExpressionLINC01813 [ NCBI-GEO ]   LINC01813 [ EBI - ARRAY_EXPRESS ]   LINC01813 [ SEEK ]   LINC01813 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01813 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927165
GTEX Portal (Tissue expression)LINC01813
Human Protein AtlasENSG00000229805-LINC01813 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01813
DMDM Disease mutations101927165
Blocks (Seattle)LINC01813
Human Protein Atlas [tissue]ENSG00000229805-LINC01813 [tissue]
Protein Interaction databases
FunCoupENSG00000229805
BioGRIDLINC01813
STRING (EMBL)LINC01813
ZODIACLINC01813
Ontologies - Pathways
Huge Navigator LINC01813 [HugePedia]
snp3D : Map Gene to Disease101927165
BioCentury BCIQLINC01813
ClinGenLINC01813
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927165
Clinical trialLINC01813
Miscellaneous
canSAR (ICR)LINC01813 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01813
EVEXLINC01813
GoPubMedLINC01813
iHOPLINC01813
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:40:16 CET 2017

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