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LINC01815 (long intergenic non-protein coding RNA 1815)

Identity

Other alias-
HGNC (Hugo) LINC01815
LocusID (NCBI) 100507201
Atlas_Id 79307
Location 2p12  [Link to chromosome band 2p12]
Location_base_pair Starts at 81461359 and ends at 81466946 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01815   52619
Cards
Entrez_Gene (NCBI)LINC01815  100507201  long intergenic non-protein coding RNA 1815
Aliases
GeneCards (Weizmann)LINC01815
Ensembl hg19 (Hinxton)ENSG00000235519 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235519 [Gene_View]  chr2:81461359-81466946 [Contig_View]  LINC01815 [Vega]
ICGC DataPortalENSG00000235519
TCGA cBioPortalLINC01815
AceView (NCBI)LINC01815
Genatlas (Paris)LINC01815
WikiGenes100507201
SOURCE (Princeton)LINC01815
Genetics Home Reference (NIH)LINC01815
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01815  -     chr2:81461359-81466946 -  2p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01815  -     2p12   [Description]    (hg19-Feb_2009)
EnsemblLINC01815 - 2p12 [CytoView hg19]  LINC01815 - 2p12 [CytoView hg38]
Mapping of homologs : NCBILINC01815 [Mapview hg19]  LINC01815 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA429605 AA432216
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01815
Cluster EST : UnigeneHs.98589 [ NCBI ]
CGAP (NCI)Hs.98589
Alternative Splicing GalleryENSG00000235519
Gene ExpressionLINC01815 [ NCBI-GEO ]   LINC01815 [ EBI - ARRAY_EXPRESS ]   LINC01815 [ SEEK ]   LINC01815 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01815 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507201
GTEX Portal (Tissue expression)LINC01815
Human Protein AtlasENSG00000235519-LINC01815 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01815
DMDM Disease mutations100507201
Blocks (Seattle)LINC01815
Human Protein Atlas [tissue]ENSG00000235519-LINC01815 [tissue]
Protein Interaction databases
FunCoupENSG00000235519
BioGRIDLINC01815
STRING (EMBL)LINC01815
ZODIACLINC01815
Ontologies - Pathways
Huge Navigator LINC01815 [HugePedia]
snp3D : Map Gene to Disease100507201
BioCentury BCIQLINC01815
ClinGenLINC01815
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507201
Clinical trialLINC01815
Miscellaneous
canSAR (ICR)LINC01815 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01815
EVEXLINC01815
GoPubMedLINC01815
iHOPLINC01815
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:09 CET 2017

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