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LINC01829 (long intergenic non-protein coding RNA 1829)

Identity

Other alias-
HGNC (Hugo) LINC01829
LocusID (NCBI) 644838
Atlas_Id 79231
Location 2p14  [Link to chromosome band 2p14]
Location_base_pair Starts at 67123357 and ends at 67215319 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01829   52635
Cards
Entrez_Gene (NCBI)LINC01829  644838  long intergenic non-protein coding RNA 1829
Aliases
GeneCards (Weizmann)LINC01829
Ensembl hg19 (Hinxton)ENSG00000236780 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236780 [Gene_View]  chr2:67123357-67215319 [Contig_View]  LINC01829 [Vega]
ICGC DataPortalENSG00000236780
TCGA cBioPortalLINC01829
AceView (NCBI)LINC01829
Genatlas (Paris)LINC01829
WikiGenes644838
SOURCE (Princeton)LINC01829
Genetics Home Reference (NIH)LINC01829
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01829  -     chr2:67123357-67215319 -  2p14   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01829  -     2p14   [Description]    (hg19-Feb_2009)
EnsemblLINC01829 - 2p14 [CytoView hg19]  LINC01829 - 2p14 [CytoView hg38]
Mapping of homologs : NCBILINC01829 [Mapview hg19]  LINC01829 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK123766
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01829
Cluster EST : UnigeneHs.145561 [ NCBI ]
CGAP (NCI)Hs.145561
Alternative Splicing GalleryENSG00000236780
Gene ExpressionLINC01829 [ NCBI-GEO ]   LINC01829 [ EBI - ARRAY_EXPRESS ]   LINC01829 [ SEEK ]   LINC01829 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01829 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)644838
GTEX Portal (Tissue expression)LINC01829
Human Protein AtlasENSG00000236780-LINC01829 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01829
DMDM Disease mutations644838
Blocks (Seattle)LINC01829
Human Protein Atlas [tissue]ENSG00000236780-LINC01829 [tissue]
Protein Interaction databases
FunCoupENSG00000236780
BioGRIDLINC01829
STRING (EMBL)LINC01829
ZODIACLINC01829
Ontologies - Pathways
Huge Navigator LINC01829 [HugePedia]
snp3D : Map Gene to Disease644838
BioCentury BCIQLINC01829
ClinGenLINC01829
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD644838
Clinical trialLINC01829
Miscellaneous
canSAR (ICR)LINC01829 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01829
EVEXLINC01829
GoPubMedLINC01829
iHOPLINC01829
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:40:18 CET 2017

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