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LINC01831 (long intergenic non-protein coding RNA 1831)

Identity

Other alias-
HGNC (Hugo) LINC01831
LocusID (NCBI) 101927331
Atlas_Id 79305
Location 2q12.1  [Link to chromosome band 2q12]
Location_base_pair Starts at 104412152 and ends at 104414031 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01831   52637
Cards
Entrez_Gene (NCBI)LINC01831  101927331  long intergenic non-protein coding RNA 1831
Aliases
GeneCards (Weizmann)LINC01831
Ensembl hg19 (Hinxton)ENSG00000225765 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225765 [Gene_View]  chr2:104412152-104414031 [Contig_View]  LINC01831 [Vega]
ICGC DataPortalENSG00000225765
TCGA cBioPortalLINC01831
AceView (NCBI)LINC01831
Genatlas (Paris)LINC01831
WikiGenes101927331
SOURCE (Princeton)LINC01831
Genetics Home Reference (NIH)LINC01831
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01831  -     chr2:104412152-104414031 -  2q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01831  -     2q12.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01831 - 2q12.1 [CytoView hg19]  LINC01831 - 2q12.1 [CytoView hg38]
Mapping of homologs : NCBILINC01831 [Mapview hg19]  LINC01831 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC014368
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01831
Cluster EST : UnigeneHs.352254 [ NCBI ]
CGAP (NCI)Hs.352254
Alternative Splicing GalleryENSG00000225765
Gene ExpressionLINC01831 [ NCBI-GEO ]   LINC01831 [ EBI - ARRAY_EXPRESS ]   LINC01831 [ SEEK ]   LINC01831 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01831 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927331
GTEX Portal (Tissue expression)LINC01831
Human Protein AtlasENSG00000225765-LINC01831 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01831
DMDM Disease mutations101927331
Blocks (Seattle)LINC01831
Human Protein Atlas [tissue]ENSG00000225765-LINC01831 [tissue]
Protein Interaction databases
FunCoupENSG00000225765
BioGRIDLINC01831
STRING (EMBL)LINC01831
ZODIACLINC01831
Ontologies - Pathways
Huge Navigator LINC01831 [HugePedia]
snp3D : Map Gene to Disease101927331
BioCentury BCIQLINC01831
ClinGenLINC01831
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927331
Clinical trialLINC01831
Miscellaneous
canSAR (ICR)LINC01831 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01831
EVEXLINC01831
GoPubMedLINC01831
iHOPLINC01831
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:40:18 CET 2017

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