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LINC01832 (long intergenic non-protein coding RNA 1832)

Identity

Other alias-
HGNC (Hugo) LINC01832
LocusID (NCBI) 105373635
Atlas_Id 78823
Location 2q22.1  [Link to chromosome band 2q22]
Location_base_pair Starts at 138101884 and ends at 138105905 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01832   52638
Cards
Entrez_Gene (NCBI)LINC01832  105373635  long intergenic non-protein coding RNA 1832
Aliases
GeneCards (Weizmann)LINC01832
Ensembl hg19 (Hinxton)ENSG00000224231 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000224231 [Gene_View]  chr2:138101884-138105905 [Contig_View]  LINC01832 [Vega]
ICGC DataPortalENSG00000224231
TCGA cBioPortalLINC01832
AceView (NCBI)LINC01832
Genatlas (Paris)LINC01832
WikiGenes105373635
SOURCE (Princeton)LINC01832
Genetics Home Reference (NIH)LINC01832
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01832  -     chr2:138101884-138105905 +  2q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01832  -     2q22.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01832 - 2q22.1 [CytoView hg19]  LINC01832 - 2q22.1 [CytoView hg38]
Mapping of homologs : NCBILINC01832 [Mapview hg19]  LINC01832 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01832
Alternative Splicing GalleryENSG00000224231
Gene ExpressionLINC01832 [ NCBI-GEO ]   LINC01832 [ EBI - ARRAY_EXPRESS ]   LINC01832 [ SEEK ]   LINC01832 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01832 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105373635
GTEX Portal (Tissue expression)LINC01832
Human Protein AtlasENSG00000224231-LINC01832 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01832
DMDM Disease mutations105373635
Blocks (Seattle)LINC01832
Human Protein Atlas [tissue]ENSG00000224231-LINC01832 [tissue]
Protein Interaction databases
FunCoupENSG00000224231
BioGRIDLINC01832
STRING (EMBL)LINC01832
ZODIACLINC01832
Ontologies - Pathways
Huge Navigator LINC01832 [HugePedia]
snp3D : Map Gene to Disease105373635
BioCentury BCIQLINC01832
ClinGenLINC01832
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105373635
Clinical trialLINC01832
Miscellaneous
canSAR (ICR)LINC01832 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01832
EVEXLINC01832
GoPubMedLINC01832
iHOPLINC01832
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:11 CET 2017

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