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LINC01838 (long intergenic non-protein coding RNA 1838)

Identity

Other alias-
HGNC (Hugo) LINC01838
LocusID (NCBI) 100652911
Atlas_Id 79216
Location 19q13.11  [Link to chromosome band 19q13]
Location_base_pair Starts at 34905315 and ends at 34908190 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01838   52654
Cards
Entrez_Gene (NCBI)LINC01838  100652911  long intergenic non-protein coding RNA 1838
Aliases
GeneCards (Weizmann)LINC01838
Ensembl hg19 (Hinxton)ENSG00000269037 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000269037 [Gene_View]  chr19:34905315-34908190 [Contig_View]  LINC01838 [Vega]
ICGC DataPortalENSG00000269037
TCGA cBioPortalLINC01838
AceView (NCBI)LINC01838
Genatlas (Paris)LINC01838
WikiGenes100652911
SOURCE (Princeton)LINC01838
Genetics Home Reference (NIH)LINC01838
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01838  -     chr19:34905315-34908190 +  19q13.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01838  -     19q13.11   [Description]    (hg19-Feb_2009)
EnsemblLINC01838 - 19q13.11 [CytoView hg19]  LINC01838 - 19q13.11 [CytoView hg38]
Mapping of homologs : NCBILINC01838 [Mapview hg19]  LINC01838 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC031235
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01838
Cluster EST : UnigeneHs.292009 [ NCBI ]
CGAP (NCI)Hs.292009
Alternative Splicing GalleryENSG00000269037
Gene ExpressionLINC01838 [ NCBI-GEO ]   LINC01838 [ EBI - ARRAY_EXPRESS ]   LINC01838 [ SEEK ]   LINC01838 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01838 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100652911
GTEX Portal (Tissue expression)LINC01838
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01838
DMDM Disease mutations100652911
Blocks (Seattle)LINC01838
Human Protein AtlasENSG00000269037
Protein Interaction databases
FunCoupENSG00000269037
BioGRIDLINC01838
STRING (EMBL)LINC01838
ZODIACLINC01838
Ontologies - Pathways
Huge Navigator LINC01838 [HugePedia]
snp3D : Map Gene to Disease100652911
BioCentury BCIQLINC01838
ClinGenLINC01838
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100652911
Clinical trialLINC01838
Miscellaneous
canSAR (ICR)LINC01838 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01838
EVEXLINC01838
GoPubMedLINC01838
iHOPLINC01838
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:15:23 CEST 2017

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