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LINC01849 (long intergenic non-protein coding RNA 1849)

Identity

Other alias-
HGNC (Hugo) LINC01849
LocusID (NCBI) 105373507
Atlas_Id 79570
Location 2q11.2  [Link to chromosome band 2q11]
Location_base_pair Starts at 100603739 and ends at 100609358 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01849   52665
Cards
Entrez_Gene (NCBI)LINC01849  105373507  long intergenic non-protein coding RNA 1849
Aliases
GeneCards (Weizmann)LINC01849
Ensembl hg19 (Hinxton)ENSG00000234988 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234988 [Gene_View]  chr2:100603739-100609358 [Contig_View]  LINC01849 [Vega]
ICGC DataPortalENSG00000234988
TCGA cBioPortalLINC01849
AceView (NCBI)LINC01849
Genatlas (Paris)LINC01849
WikiGenes105373507
SOURCE (Princeton)LINC01849
Genetics Home Reference (NIH)LINC01849
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01849  -     chr2:100603739-100609358 +  2q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01849  -     2q11.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01849 - 2q11.2 [CytoView hg19]  LINC01849 - 2q11.2 [CytoView hg38]
Mapping of homologs : NCBILINC01849 [Mapview hg19]  LINC01849 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01849
Alternative Splicing GalleryENSG00000234988
Gene ExpressionLINC01849 [ NCBI-GEO ]   LINC01849 [ EBI - ARRAY_EXPRESS ]   LINC01849 [ SEEK ]   LINC01849 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01849 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105373507
GTEX Portal (Tissue expression)LINC01849
Human Protein AtlasENSG00000234988-LINC01849 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01849
DMDM Disease mutations105373507
Blocks (Seattle)LINC01849
Human Protein Atlas [tissue]ENSG00000234988-LINC01849 [tissue]
Protein Interaction databases
FunCoupENSG00000234988
BioGRIDLINC01849
STRING (EMBL)LINC01849
ZODIACLINC01849
Ontologies - Pathways
Huge Navigator LINC01849 [HugePedia]
snp3D : Map Gene to Disease105373507
BioCentury BCIQLINC01849
ClinGenLINC01849
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105373507
Clinical trialLINC01849
Miscellaneous
canSAR (ICR)LINC01849 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01849
EVEXLINC01849
GoPubMedLINC01849
iHOPLINC01849
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:40:21 CET 2017

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