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LINC01855 (long intergenic non-protein coding RNA 1855)

Identity

Other alias-
HGNC (Hugo) LINC01855
LocusID (NCBI) 105372292
Atlas_Id 79288
Location 19p13.12  [Link to chromosome band 19p13]
Location_base_pair Starts at 16065687 and ends at 16066303 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01855   52675
Cards
Entrez_Gene (NCBI)LINC01855  105372292  long intergenic non-protein coding RNA 1855
Aliases
GeneCards (Weizmann)LINC01855
Ensembl hg19 (Hinxton)ENSG00000267517 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000267517 [Gene_View]  chr19:16065687-16066303 [Contig_View]  LINC01855 [Vega]
ICGC DataPortalENSG00000267517
TCGA cBioPortalLINC01855
AceView (NCBI)LINC01855
Genatlas (Paris)LINC01855
WikiGenes105372292
SOURCE (Princeton)LINC01855
Genetics Home Reference (NIH)LINC01855
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01855  -     chr19:16065687-16066303 +  19p13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01855  -     19p13.12   [Description]    (hg19-Feb_2009)
EnsemblLINC01855 - 19p13.12 [CytoView hg19]  LINC01855 - 19p13.12 [CytoView hg38]
Mapping of homologs : NCBILINC01855 [Mapview hg19]  LINC01855 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI743530 BX118437
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01855
Cluster EST : UnigeneHs.635664 [ NCBI ]
CGAP (NCI)Hs.635664
Alternative Splicing GalleryENSG00000267517
Gene ExpressionLINC01855 [ NCBI-GEO ]   LINC01855 [ EBI - ARRAY_EXPRESS ]   LINC01855 [ SEEK ]   LINC01855 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01855 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105372292
GTEX Portal (Tissue expression)LINC01855
Human Protein AtlasENSG00000267517-LINC01855 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01855
DMDM Disease mutations105372292
Blocks (Seattle)LINC01855
Human Protein Atlas [tissue]ENSG00000267517-LINC01855 [tissue]
Protein Interaction databases
FunCoupENSG00000267517
BioGRIDLINC01855
STRING (EMBL)LINC01855
ZODIACLINC01855
Ontologies - Pathways
Huge Navigator LINC01855 [HugePedia]
snp3D : Map Gene to Disease105372292
BioCentury BCIQLINC01855
ClinGenLINC01855
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105372292
Clinical trialLINC01855
Miscellaneous
canSAR (ICR)LINC01855 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01855
EVEXLINC01855
GoPubMedLINC01855
iHOPLINC01855
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:38:58 CET 2017

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