Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC01858 (long intergenic non-protein coding RNA 1858)


Alias (NCBI)-
HGNC (Hugo) LINC01858
LocusID (NCBI) 101929144
Atlas_Id 80167
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 23054823 and ends at 23061265 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC01858   52676
Entrez_Gene (NCBI)LINC01858    long intergenic non-protein coding RNA 1858
GeneCards (Weizmann)LINC01858
Ensembl hg19 (Hinxton)ENSG00000261615 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000261615 [Gene_View]  ENSG00000261615 [Sequence]  chr19:23054823-23061265 [Contig_View]  LINC01858 [Vega]
ICGC DataPortalENSG00000261615
TCGA cBioPortalLINC01858
AceView (NCBI)LINC01858
Genatlas (Paris)LINC01858
SOURCE (Princeton)LINC01858
Genetics Home Reference (NIH)LINC01858
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01858  -     chr19:23054823-23061265 -  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01858  -     19p12   [Description]    (hg19-Feb_2009)
GoldenPathLINC01858 - 19p12 [CytoView hg19]  LINC01858 - 19p12 [CytoView hg38]
Genome Data Viewer NCBILINC01858 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC037873
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01858
Gene ExpressionLINC01858 [ NCBI-GEO ]   LINC01858 [ EBI - ARRAY_EXPRESS ]   LINC01858 [ SEEK ]   LINC01858 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01858 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01858 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101929144
GTEX Portal (Tissue expression)LINC01858
Human Protein AtlasENSG00000261615-LINC01858 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01858
Human Protein Atlas [tissue]ENSG00000261615-LINC01858 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 20 13:28:11 CET 2022

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