Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01858 (long intergenic non-protein coding RNA 1858)

Identity

Other alias-
HGNC (Hugo) LINC01858
LocusID (NCBI) 101929144
Atlas_Id 80167
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 23054823 and ends at 23061265 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01858   52676
Cards
Entrez_Gene (NCBI)LINC01858  101929144  long intergenic non-protein coding RNA 1858
Aliases
GeneCards (Weizmann)LINC01858
Ensembl hg19 (Hinxton)ENSG00000261615 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000261615 [Gene_View]  chr19:23054823-23061265 [Contig_View]  LINC01858 [Vega]
ICGC DataPortalENSG00000261615
TCGA cBioPortalLINC01858
AceView (NCBI)LINC01858
Genatlas (Paris)LINC01858
WikiGenes101929144
SOURCE (Princeton)LINC01858
Genetics Home Reference (NIH)LINC01858
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01858  -     chr19:23054823-23061265 -  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01858  -     19p12   [Description]    (hg19-Feb_2009)
EnsemblLINC01858 - 19p12 [CytoView hg19]  LINC01858 - 19p12 [CytoView hg38]
Mapping of homologs : NCBILINC01858 [Mapview hg19]  LINC01858 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC037873
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01858
Cluster EST : UnigeneHs.531631 [ NCBI ]
CGAP (NCI)Hs.531631
Alternative Splicing GalleryENSG00000261615
Gene ExpressionLINC01858 [ NCBI-GEO ]   LINC01858 [ EBI - ARRAY_EXPRESS ]   LINC01858 [ SEEK ]   LINC01858 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01858 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929144
GTEX Portal (Tissue expression)LINC01858
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01858
DMDM Disease mutations101929144
Blocks (Seattle)LINC01858
Human Protein AtlasENSG00000261615
Protein Interaction databases
FunCoupENSG00000261615
BioGRIDLINC01858
STRING (EMBL)LINC01858
ZODIACLINC01858
Ontologies - Pathways
Huge Navigator LINC01858 [HugePedia]
snp3D : Map Gene to Disease101929144
BioCentury BCIQLINC01858
ClinGenLINC01858
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929144
Clinical trialLINC01858
Miscellaneous
canSAR (ICR)LINC01858 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01858
EVEXLINC01858
GoPubMedLINC01858
iHOPLINC01858
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:15:26 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.