Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01865 (long intergenic non-protein coding RNA 1865)

Identity

Other alias-
HGNC (Hugo) LINC01865
LocusID (NCBI) 105373350
Atlas_Id 79891
Location 2p25.3  [Link to chromosome band 2p25]
Location_base_pair Starts at 316284 and ends at 337054 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01865   52684
Cards
Entrez_Gene (NCBI)LINC01865  105373350  long intergenic non-protein coding RNA 1865
Aliases
GeneCards (Weizmann)LINC01865
Ensembl hg19 (Hinxton)ENSG00000233684 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233684 [Gene_View]  chr2:316284-337054 [Contig_View]  LINC01865 [Vega]
ICGC DataPortalENSG00000233684
TCGA cBioPortalLINC01865
AceView (NCBI)LINC01865
Genatlas (Paris)LINC01865
WikiGenes105373350
SOURCE (Princeton)LINC01865
Genetics Home Reference (NIH)LINC01865
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01865  -     chr2:316284-337054 +  2p25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01865  -     2p25.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01865 - 2p25.3 [CytoView hg19]  LINC01865 - 2p25.3 [CytoView hg38]
Mapping of homologs : NCBILINC01865 [Mapview hg19]  LINC01865 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01865
Alternative Splicing GalleryENSG00000233684
Gene ExpressionLINC01865 [ NCBI-GEO ]   LINC01865 [ EBI - ARRAY_EXPRESS ]   LINC01865 [ SEEK ]   LINC01865 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01865 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105373350
GTEX Portal (Tissue expression)LINC01865
Human Protein AtlasENSG00000233684-LINC01865 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01865
DMDM Disease mutations105373350
Blocks (Seattle)LINC01865
Human Protein Atlas [tissue]ENSG00000233684-LINC01865 [tissue]
Protein Interaction databases
FunCoupENSG00000233684
BioGRIDLINC01865
STRING (EMBL)LINC01865
ZODIACLINC01865
Ontologies - Pathways
Huge Navigator LINC01865 [HugePedia]
snp3D : Map Gene to Disease105373350
BioCentury BCIQLINC01865
ClinGenLINC01865
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105373350
Clinical trialLINC01865
Miscellaneous
canSAR (ICR)LINC01865 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01865
EVEXLINC01865
GoPubMedLINC01865
iHOPLINC01865
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:13 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.