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LINC01869 (long intergenic non-protein coding RNA 1869)

Identity

Alias_symbol (synonym)MGC45922
Other alias-
HGNC (Hugo) LINC01869
LocusID (NCBI) 284365
Atlas_Id 79672
Location 19q13.33  [Link to chromosome band 19q13]
Location_base_pair Starts at 50817681 and ends at 50818878 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01869   25050
Cards
Entrez_Gene (NCBI)LINC01869  284365  long intergenic non-protein coding RNA 1869
Aliases
GeneCards (Weizmann)LINC01869
Ensembl hg19 (Hinxton)ENSG00000180279 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000180279 [Gene_View]  chr19:50817681-50818878 [Contig_View]  LINC01869 [Vega]
ICGC DataPortalENSG00000180279
TCGA cBioPortalLINC01869
AceView (NCBI)LINC01869
Genatlas (Paris)LINC01869
WikiGenes284365
SOURCE (Princeton)LINC01869
Genetics Home Reference (NIH)LINC01869
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01869  -     chr19:50817681-50818878 +  19q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01869  -     19q13.33   [Description]    (hg19-Feb_2009)
EnsemblLINC01869 - 19q13.33 [CytoView hg19]  LINC01869 - 19q13.33 [CytoView hg38]
Mapping of homologs : NCBILINC01869 [Mapview hg19]  LINC01869 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC033237
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01869
Cluster EST : UnigeneHs.161397 [ NCBI ]
CGAP (NCI)Hs.161397
Alternative Splicing GalleryENSG00000180279
Gene ExpressionLINC01869 [ NCBI-GEO ]   LINC01869 [ EBI - ARRAY_EXPRESS ]   LINC01869 [ SEEK ]   LINC01869 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01869 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)284365
GTEX Portal (Tissue expression)LINC01869
Human Protein AtlasENSG00000180279-LINC01869 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01869
DMDM Disease mutations284365
Blocks (Seattle)LINC01869
Human Protein Atlas [tissue]ENSG00000180279-LINC01869 [tissue]
IPIIPI00166796   
Protein Interaction databases
FunCoupENSG00000180279
BioGRIDLINC01869
STRING (EMBL)LINC01869
ZODIACLINC01869
Ontologies - Pathways
Huge Navigator LINC01869 [HugePedia]
snp3D : Map Gene to Disease284365
BioCentury BCIQLINC01869
ClinGenLINC01869
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284365
Clinical trialLINC01869
Miscellaneous
canSAR (ICR)LINC01869 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01869
EVEXLINC01869
GoPubMedLINC01869
iHOPLINC01869
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:38:58 CET 2017

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