Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01872 (long intergenic non-protein coding RNA 1872)

Identity

Other alias-
HGNC (Hugo) LINC01872
LocusID (NCBI) 105372444
Atlas_Id 79932
Location 19q13.41  [Link to chromosome band 19q13]
Location_base_pair Starts at 51271266 and ends at 51281234 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01872   52691
Cards
Entrez_Gene (NCBI)LINC01872  105372444  long intergenic non-protein coding RNA 1872
Aliases
GeneCards (Weizmann)LINC01872
Ensembl hg19 (Hinxton)ENSG00000268318 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000268318 [Gene_View]  chr19:51271266-51281234 [Contig_View]  LINC01872 [Vega]
ICGC DataPortalENSG00000268318
TCGA cBioPortalLINC01872
AceView (NCBI)LINC01872
Genatlas (Paris)LINC01872
WikiGenes105372444
SOURCE (Princeton)LINC01872
Genetics Home Reference (NIH)LINC01872
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01872  -     chr19:51271266-51281234 +  19q13.41   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01872  -     19q13.41   [Description]    (hg19-Feb_2009)
EnsemblLINC01872 - 19q13.41 [CytoView hg19]  LINC01872 - 19q13.41 [CytoView hg38]
Mapping of homologs : NCBILINC01872 [Mapview hg19]  LINC01872 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CR746448 HY188020
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01872
Cluster EST : UnigeneHs.740053 [ NCBI ]
CGAP (NCI)Hs.740053
Alternative Splicing GalleryENSG00000268318
Gene ExpressionLINC01872 [ NCBI-GEO ]   LINC01872 [ EBI - ARRAY_EXPRESS ]   LINC01872 [ SEEK ]   LINC01872 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01872 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105372444
GTEX Portal (Tissue expression)LINC01872
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01872
DMDM Disease mutations105372444
Blocks (Seattle)LINC01872
Human Protein AtlasENSG00000268318
Protein Interaction databases
FunCoupENSG00000268318
BioGRIDLINC01872
STRING (EMBL)LINC01872
ZODIACLINC01872
Ontologies - Pathways
Huge Navigator LINC01872 [HugePedia]
snp3D : Map Gene to Disease105372444
BioCentury BCIQLINC01872
ClinGenLINC01872
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105372444
Clinical trialLINC01872
Miscellaneous
canSAR (ICR)LINC01872 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01872
EVEXLINC01872
GoPubMedLINC01872
iHOPLINC01872
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:15:27 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.