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LINC01873 (long intergenic non-protein coding RNA 1873)

Identity

Other alias-
HGNC (Hugo) LINC01873
LocusID (NCBI) 729348
Atlas_Id 78991
Location 2p14  [Link to chromosome band 2p14]
Location_base_pair Starts at 66383306 and ends at 66392446 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01873   52692
Cards
Entrez_Gene (NCBI)LINC01873  729348  long intergenic non-protein coding RNA 1873
Aliases
GeneCards (Weizmann)LINC01873
Ensembl hg19 (Hinxton)ENSG00000232164 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232164 [Gene_View]  chr2:66383306-66392446 [Contig_View]  LINC01873 [Vega]
ICGC DataPortalENSG00000232164
TCGA cBioPortalLINC01873
AceView (NCBI)LINC01873
Genatlas (Paris)LINC01873
WikiGenes729348
SOURCE (Princeton)LINC01873
Genetics Home Reference (NIH)LINC01873
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01873  -     chr2:66383306-66392446 +  2p14   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01873  -     2p14   [Description]    (hg19-Feb_2009)
EnsemblLINC01873 - 2p14 [CytoView hg19]  LINC01873 - 2p14 [CytoView hg38]
Mapping of homologs : NCBILINC01873 [Mapview hg19]  LINC01873 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC041424
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01873
Cluster EST : UnigeneHs.723595 [ NCBI ]
CGAP (NCI)Hs.723595
Alternative Splicing GalleryENSG00000232164
Gene ExpressionLINC01873 [ NCBI-GEO ]   LINC01873 [ EBI - ARRAY_EXPRESS ]   LINC01873 [ SEEK ]   LINC01873 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01873 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)729348
GTEX Portal (Tissue expression)LINC01873
Human Protein AtlasENSG00000232164-LINC01873 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01873
DMDM Disease mutations729348
Blocks (Seattle)LINC01873
Human Protein Atlas [tissue]ENSG00000232164-LINC01873 [tissue]
Protein Interaction databases
FunCoupENSG00000232164
BioGRIDLINC01873
STRING (EMBL)LINC01873
ZODIACLINC01873
Ontologies - Pathways
Huge Navigator LINC01873 [HugePedia]
snp3D : Map Gene to Disease729348
BioCentury BCIQLINC01873
ClinGenLINC01873
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729348
Clinical trialLINC01873
Miscellaneous
canSAR (ICR)LINC01873 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01873
EVEXLINC01873
GoPubMedLINC01873
iHOPLINC01873
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:13 CET 2017

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