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LINC01874 (long intergenic non-protein coding RNA 1874)

Identity

Other alias-
HGNC (Hugo) LINC01874
LocusID (NCBI) 727944
Atlas_Id 79602
Location 2p25.3  [Link to chromosome band 2p25]
Location_base_pair Starts at 490947 and ends at 492655 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01874   52693
Cards
Entrez_Gene (NCBI)LINC01874  727944  long intergenic non-protein coding RNA 1874
Aliases
GeneCards (Weizmann)LINC01874
Ensembl hg19 (Hinxton)ENSG00000223985 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223985 [Gene_View]  chr2:490947-492655 [Contig_View]  LINC01874 [Vega]
ICGC DataPortalENSG00000223985
TCGA cBioPortalLINC01874
AceView (NCBI)LINC01874
Genatlas (Paris)LINC01874
WikiGenes727944
SOURCE (Princeton)LINC01874
Genetics Home Reference (NIH)LINC01874
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01874  -     chr2:490947-492655 -  2p25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01874  -     2p25.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01874 - 2p25.3 [CytoView hg19]  LINC01874 - 2p25.3 [CytoView hg38]
Mapping of homologs : NCBILINC01874 [Mapview hg19]  LINC01874 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01874
Alternative Splicing GalleryENSG00000223985
Gene ExpressionLINC01874 [ NCBI-GEO ]   LINC01874 [ EBI - ARRAY_EXPRESS ]   LINC01874 [ SEEK ]   LINC01874 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01874 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)727944
GTEX Portal (Tissue expression)LINC01874
Human Protein AtlasENSG00000223985-LINC01874 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01874
DMDM Disease mutations727944
Blocks (Seattle)LINC01874
Human Protein Atlas [tissue]ENSG00000223985-LINC01874 [tissue]
Protein Interaction databases
FunCoupENSG00000223985
BioGRIDLINC01874
STRING (EMBL)LINC01874
ZODIACLINC01874
Ontologies - Pathways
Huge Navigator LINC01874 [HugePedia]
snp3D : Map Gene to Disease727944
BioCentury BCIQLINC01874
ClinGenLINC01874
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD727944
Clinical trialLINC01874
Miscellaneous
canSAR (ICR)LINC01874 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01874
EVEXLINC01874
GoPubMedLINC01874
iHOPLINC01874
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:13 CET 2017

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