Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LINC01876 (long intergenic non-protein coding RNA 1876)

Identity

Other alias-
HGNC (Hugo) LINC01876
LocusID (NCBI) 101929378
Atlas_Id 80093
Location 2q24.1  [Link to chromosome band 2q24]
Location_base_pair Starts at 156020535 and ends at 156254931 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01876   52695
Cards
Entrez_Gene (NCBI)LINC01876  101929378  long intergenic non-protein coding RNA 1876
Aliases
GeneCards (Weizmann)LINC01876
Ensembl hg19 (Hinxton)ENSG00000226383 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226383 [Gene_View]  chr2:156020535-156254931 [Contig_View]  LINC01876 [Vega]
ICGC DataPortalENSG00000226383
TCGA cBioPortalLINC01876
AceView (NCBI)LINC01876
Genatlas (Paris)LINC01876
WikiGenes101929378
SOURCE (Princeton)LINC01876
Genetics Home Reference (NIH)LINC01876
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01876  -     chr2:156020535-156254931 -  2q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01876  -     2q24.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01876 - 2q24.1 [CytoView hg19]  LINC01876 - 2q24.1 [CytoView hg38]
Mapping of homologs : NCBILINC01876 [Mapview hg19]  LINC01876 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC032407 CN272405 DB016766
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01876
Cluster EST : UnigeneHs.171192 [ NCBI ]
CGAP (NCI)Hs.171192
Alternative Splicing GalleryENSG00000226383
Gene ExpressionLINC01876 [ NCBI-GEO ]   LINC01876 [ EBI - ARRAY_EXPRESS ]   LINC01876 [ SEEK ]   LINC01876 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01876 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929378
GTEX Portal (Tissue expression)LINC01876
Human Protein AtlasENSG00000226383-LINC01876 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01876
DMDM Disease mutations101929378
Blocks (Seattle)LINC01876
Human Protein Atlas [tissue]ENSG00000226383-LINC01876 [tissue]
Protein Interaction databases
FunCoupENSG00000226383
BioGRIDLINC01876
STRING (EMBL)LINC01876
ZODIACLINC01876
Ontologies - Pathways
Huge Navigator LINC01876 [HugePedia]
snp3D : Map Gene to Disease101929378
BioCentury BCIQLINC01876
ClinGenLINC01876
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929378
Clinical trialLINC01876
Miscellaneous
canSAR (ICR)LINC01876 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01876
EVEXLINC01876
GoPubMedLINC01876
iHOPLINC01876
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:14 CET 2017

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