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LINC01886 (long intergenic non-protein coding RNA 1886)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC01886
LocusID (NCBI) 105373537
Atlas_Id 79111
Location 2q12.3  [Link to chromosome band 2q12]
Location_base_pair Starts at 107529419 and ends at 107556496 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)LINC01886   52705
Cards
Entrez_Gene (NCBI)LINC01886    long intergenic non-protein coding RNA 1886
Aliases
GeneCards (Weizmann)LINC01886
Ensembl hg19 (Hinxton)ENSG00000224568 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000224568 [Gene_View]  ENSG00000224568 [Sequence]  chr2:107529419-107556496 [Contig_View]  LINC01886 [Vega]
ICGC DataPortalENSG00000224568
TCGA cBioPortalLINC01886
AceView (NCBI)LINC01886
Genatlas (Paris)LINC01886
SOURCE (Princeton)LINC01886
Genetics Home Reference (NIH)LINC01886
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01886  -     chr2:107529419-107556496 +  2q12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01886  -     2q12.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC01886 - 2q12.3 [CytoView hg19]  LINC01886 - 2q12.3 [CytoView hg38]
ImmunoBaseENSG00000224568
Genome Data Viewer NCBILINC01886 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01886
Gene ExpressionLINC01886 [ NCBI-GEO ]   LINC01886 [ EBI - ARRAY_EXPRESS ]   LINC01886 [ SEEK ]   LINC01886 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01886 [ Firebrowse - Broad ]
GenevisibleExpression of LINC01886 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)105373537
GTEX Portal (Tissue expression)LINC01886
Human Protein AtlasENSG00000224568-LINC01886 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01886
Human Protein Atlas [tissue]ENSG00000224568-LINC01886 [tissue]
Protein Interaction databases
BioGRIDLINC01886
STRING (EMBL)LINC01886
ZODIACLINC01886
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC01886
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:58:59 CEST 2021

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