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LINC01891 (long intergenic non-protein coding RNA 1891)

Identity

Other alias-
HGNC (Hugo) LINC01891
LocusID (NCBI) 105373934
Atlas_Id 78986
Location 2q37.1  [Link to chromosome band 2q37]
Location_base_pair Starts at 234444590 and ends at 234454595 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01891   52710
Cards
Entrez_Gene (NCBI)LINC01891  105373934  long intergenic non-protein coding RNA 1891
Aliases
GeneCards (Weizmann)LINC01891
Ensembl hg19 (Hinxton)ENSG00000231682 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231682 [Gene_View]  chr2:234444590-234454595 [Contig_View]  LINC01891 [Vega]
ICGC DataPortalENSG00000231682
TCGA cBioPortalLINC01891
AceView (NCBI)LINC01891
Genatlas (Paris)LINC01891
WikiGenes105373934
SOURCE (Princeton)LINC01891
Genetics Home Reference (NIH)LINC01891
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01891  -     chr2:234444590-234454595 -  2q37.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01891  -     2q37.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01891 - 2q37.1 [CytoView hg19]  LINC01891 - 2q37.1 [CytoView hg38]
Mapping of homologs : NCBILINC01891 [Mapview hg19]  LINC01891 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA977316
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01891
Cluster EST : UnigeneHs.471685 [ NCBI ]
CGAP (NCI)Hs.471685
Alternative Splicing GalleryENSG00000231682
Gene ExpressionLINC01891 [ NCBI-GEO ]   LINC01891 [ EBI - ARRAY_EXPRESS ]   LINC01891 [ SEEK ]   LINC01891 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01891 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105373934
GTEX Portal (Tissue expression)LINC01891
Human Protein AtlasENSG00000231682-LINC01891 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01891
DMDM Disease mutations105373934
Blocks (Seattle)LINC01891
Human Protein Atlas [tissue]ENSG00000231682-LINC01891 [tissue]
Protein Interaction databases
FunCoupENSG00000231682
BioGRIDLINC01891
STRING (EMBL)LINC01891
ZODIACLINC01891
Ontologies - Pathways
Huge Navigator LINC01891 [HugePedia]
snp3D : Map Gene to Disease105373934
BioCentury BCIQLINC01891
ClinGenLINC01891
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105373934
Clinical trialLINC01891
Miscellaneous
canSAR (ICR)LINC01891 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01891
EVEXLINC01891
GoPubMedLINC01891
iHOPLINC01891
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:15 CET 2017

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