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LINC01892 (long intergenic non-protein coding RNA 1892)

Identity

Other alias-
HGNC (Hugo) LINC01892
LocusID (NCBI) 105371969
Atlas_Id 79291
Location 18p11.31  [Link to chromosome band 18p11]
Location_base_pair Starts at 5081182 and ends at 5098780 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01892   52711
Cards
Entrez_Gene (NCBI)LINC01892  105371969  long intergenic non-protein coding RNA 1892
Aliases
GeneCards (Weizmann)LINC01892
Ensembl hg19 (Hinxton)ENSG00000265514 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265514 [Gene_View]  chr18:5081182-5098780 [Contig_View]  LINC01892 [Vega]
ICGC DataPortalENSG00000265514
TCGA cBioPortalLINC01892
AceView (NCBI)LINC01892
Genatlas (Paris)LINC01892
WikiGenes105371969
SOURCE (Princeton)LINC01892
Genetics Home Reference (NIH)LINC01892
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01892  -     chr18:5081182-5098780 +  18p11.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01892  -     18p11.31   [Description]    (hg19-Feb_2009)
EnsemblLINC01892 - 18p11.31 [CytoView hg19]  LINC01892 - 18p11.31 [CytoView hg38]
Mapping of homologs : NCBILINC01892 [Mapview hg19]  LINC01892 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA436835 AA442592 DB074698
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01892
Cluster EST : UnigeneHs.599709 [ NCBI ]
CGAP (NCI)Hs.599709
Alternative Splicing GalleryENSG00000265514
Gene ExpressionLINC01892 [ NCBI-GEO ]   LINC01892 [ EBI - ARRAY_EXPRESS ]   LINC01892 [ SEEK ]   LINC01892 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01892 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105371969
GTEX Portal (Tissue expression)LINC01892
Human Protein AtlasENSG00000265514-LINC01892 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01892
DMDM Disease mutations105371969
Blocks (Seattle)LINC01892
Human Protein Atlas [tissue]ENSG00000265514-LINC01892 [tissue]
Protein Interaction databases
FunCoupENSG00000265514
BioGRIDLINC01892
STRING (EMBL)LINC01892
ZODIACLINC01892
Ontologies - Pathways
Huge Navigator LINC01892 [HugePedia]
snp3D : Map Gene to Disease105371969
BioCentury BCIQLINC01892
ClinGenLINC01892
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105371969
Clinical trialLINC01892
Miscellaneous
canSAR (ICR)LINC01892 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01892
EVEXLINC01892
GoPubMedLINC01892
iHOPLINC01892
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:37:38 CET 2017

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