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LINC01895 (long intergenic non-protein coding RNA 1895)

Identity

Other alias-
HGNC (Hugo) LINC01895
LocusID (NCBI) 105371964
Atlas_Id 79841
Location 18p11.31  [Link to chromosome band 18p11]
Location_base_pair Starts at 3347703 and ends at 3350559 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01895   52714
Cards
Entrez_Gene (NCBI)LINC01895  105371964  long intergenic non-protein coding RNA 1895
Aliases
GeneCards (Weizmann)LINC01895
Ensembl hg19 (Hinxton)ENSG00000259256 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000259256 [Gene_View]  chr18:3347703-3350559 [Contig_View]  LINC01895 [Vega]
ICGC DataPortalENSG00000259256
TCGA cBioPortalLINC01895
AceView (NCBI)LINC01895
Genatlas (Paris)LINC01895
WikiGenes105371964
SOURCE (Princeton)LINC01895
Genetics Home Reference (NIH)LINC01895
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01895  -     chr18:3347703-3350559 -  18p11.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01895  -     18p11.31   [Description]    (hg19-Feb_2009)
EnsemblLINC01895 - 18p11.31 [CytoView hg19]  LINC01895 - 18p11.31 [CytoView hg38]
Mapping of homologs : NCBILINC01895 [Mapview hg19]  LINC01895 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA469958
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01895
Cluster EST : UnigeneHs.105326 [ NCBI ]
CGAP (NCI)Hs.105326
Alternative Splicing GalleryENSG00000259256
Gene ExpressionLINC01895 [ NCBI-GEO ]   LINC01895 [ EBI - ARRAY_EXPRESS ]   LINC01895 [ SEEK ]   LINC01895 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01895 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105371964
GTEX Portal (Tissue expression)LINC01895
Human Protein AtlasENSG00000259256-LINC01895 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01895
DMDM Disease mutations105371964
Blocks (Seattle)LINC01895
Human Protein Atlas [tissue]ENSG00000259256-LINC01895 [tissue]
Protein Interaction databases
FunCoupENSG00000259256
BioGRIDLINC01895
STRING (EMBL)LINC01895
ZODIACLINC01895
Ontologies - Pathways
Huge Navigator LINC01895 [HugePedia]
snp3D : Map Gene to Disease105371964
BioCentury BCIQLINC01895
ClinGenLINC01895
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105371964
Clinical trialLINC01895
Miscellaneous
canSAR (ICR)LINC01895 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01895
EVEXLINC01895
GoPubMedLINC01895
iHOPLINC01895
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:37:39 CET 2017

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