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LINC01898 (long intergenic non-protein coding RNA 1898)

Identity

Other alias-
HGNC (Hugo) LINC01898
LocusID (NCBI) 100505853
Atlas_Id 78885
Location 18q23  [Link to chromosome band 18q23]
Location_base_pair Starts at 75696083 and ends at 75712403 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

1 Pubmed reference(s) in Entrez
Nomenclature
HGNC (Hugo)LINC01898   52717
Cards
Entrez_Gene (NCBI)LINC01898  100505853  long intergenic non-protein coding RNA 1898
Aliases
GeneCards (Weizmann)LINC01898
Ensembl hg19 (Hinxton)ENSG00000261194 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000261194 [Gene_View]  chr18:75696083-75712403 [Contig_View]  LINC01898 [Vega]
ICGC DataPortalENSG00000261194
TCGA cBioPortalLINC01898
AceView (NCBI)LINC01898
Genatlas (Paris)LINC01898
WikiGenes100505853
SOURCE (Princeton)LINC01898
Genetics Home Reference (NIH)LINC01898
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01898  -     chr18:75696083-75712403 -  18q23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01898  -     18q23   [Description]    (hg19-Feb_2009)
EnsemblLINC01898 - 18q23 [CytoView hg19]  LINC01898 - 18q23 [CytoView hg38]
Mapping of homologs : NCBILINC01898 [Mapview hg19]  LINC01898 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC037384 DB046018
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01898
Cluster EST : UnigeneHs.146758 [ NCBI ]
CGAP (NCI)Hs.146758
Alternative Splicing GalleryENSG00000261194
Gene ExpressionLINC01898 [ NCBI-GEO ]   LINC01898 [ EBI - ARRAY_EXPRESS ]   LINC01898 [ SEEK ]   LINC01898 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01898 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505853
GTEX Portal (Tissue expression)LINC01898
Human Protein AtlasENSG00000261194-LINC01898 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01898
DMDM Disease mutations100505853
Blocks (Seattle)LINC01898
Human Protein Atlas [tissue]ENSG00000261194-LINC01898 [tissue]
Protein Interaction databases
FunCoupENSG00000261194
BioGRIDLINC01898
STRING (EMBL)LINC01898
ZODIACLINC01898
Ontologies - Pathways
Huge Navigator LINC01898 [HugePedia]
snp3D : Map Gene to Disease100505853
BioCentury BCIQLINC01898
ClinGenLINC01898
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505853
Clinical trialLINC01898
Miscellaneous
canSAR (ICR)LINC01898 (select the gene name)
Probes
Litterature
PubMed
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01898
EVEXLINC01898
GoPubMedLINC01898
iHOPLINC01898
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:37:39 CET 2017

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