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LINC01899 (long intergenic non-protein coding RNA 1899)

Identity

Other alias-
HGNC (Hugo) LINC01899
LocusID (NCBI) 102724913
Atlas_Id 79308
Location 18q22.3  [Link to chromosome band 18q22]
Location_base_pair Starts at 71732616 and ends at 71782226 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01899   52718
Cards
Entrez_Gene (NCBI)LINC01899  102724913  long intergenic non-protein coding RNA 1899
Aliases
GeneCards (Weizmann)LINC01899
Ensembl hg19 (Hinxton)ENSG00000265352 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265352 [Gene_View]  chr18:71732616-71782226 [Contig_View]  LINC01899 [Vega]
ICGC DataPortalENSG00000265352
TCGA cBioPortalLINC01899
AceView (NCBI)LINC01899
Genatlas (Paris)LINC01899
WikiGenes102724913
SOURCE (Princeton)LINC01899
Genetics Home Reference (NIH)LINC01899
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01899  -     chr18:71732616-71782226 -  18q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01899  -     18q22.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01899 - 18q22.3 [CytoView hg19]  LINC01899 - 18q22.3 [CytoView hg38]
Mapping of homologs : NCBILINC01899 [Mapview hg19]  LINC01899 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01899
Alternative Splicing GalleryENSG00000265352
Gene ExpressionLINC01899 [ NCBI-GEO ]   LINC01899 [ EBI - ARRAY_EXPRESS ]   LINC01899 [ SEEK ]   LINC01899 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01899 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102724913
GTEX Portal (Tissue expression)LINC01899
Human Protein AtlasENSG00000265352-LINC01899 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01899
DMDM Disease mutations102724913
Blocks (Seattle)LINC01899
Human Protein Atlas [tissue]ENSG00000265352-LINC01899 [tissue]
Protein Interaction databases
FunCoupENSG00000265352
BioGRIDLINC01899
STRING (EMBL)LINC01899
ZODIACLINC01899
Ontologies - Pathways
Huge Navigator LINC01899 [HugePedia]
snp3D : Map Gene to Disease102724913
BioCentury BCIQLINC01899
ClinGenLINC01899
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102724913
Clinical trialLINC01899
Miscellaneous
canSAR (ICR)LINC01899 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01899
EVEXLINC01899
GoPubMedLINC01899
iHOPLINC01899
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:37:39 CET 2017

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