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LINC01907 (long intergenic non-protein coding RNA 1907)

Identity

Other alias-
HGNC (Hugo) LINC01907
LocusID (NCBI) 151475
Atlas_Id 78846
Location 2q37.1  [Link to chromosome band 2q37]
Location_base_pair Starts at 230690921 and ends at 230700529 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01907   52726
Cards
Entrez_Gene (NCBI)LINC01907  151475  long intergenic non-protein coding RNA 1907
Aliases
GeneCards (Weizmann)LINC01907
Ensembl hg19 (Hinxton)ENSG00000226125 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226125 [Gene_View]  chr2:230690921-230700529 [Contig_View]  LINC01907 [Vega]
ICGC DataPortalENSG00000226125
TCGA cBioPortalLINC01907
AceView (NCBI)LINC01907
Genatlas (Paris)LINC01907
WikiGenes151475
SOURCE (Princeton)LINC01907
Genetics Home Reference (NIH)LINC01907
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01907  -     chr2:230690921-230700529 -  2q37.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01907  -     2q37.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01907 - 2q37.1 [CytoView hg19]  LINC01907 - 2q37.1 [CytoView hg38]
Mapping of homologs : NCBILINC01907 [Mapview hg19]  LINC01907 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055016
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01907
Cluster EST : UnigeneHs.528154 [ NCBI ]
CGAP (NCI)Hs.528154
Alternative Splicing GalleryENSG00000226125
Gene ExpressionLINC01907 [ NCBI-GEO ]   LINC01907 [ EBI - ARRAY_EXPRESS ]   LINC01907 [ SEEK ]   LINC01907 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01907 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)151475
GTEX Portal (Tissue expression)LINC01907
Human Protein AtlasENSG00000226125-LINC01907 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01907
DMDM Disease mutations151475
Blocks (Seattle)LINC01907
Human Protein Atlas [tissue]ENSG00000226125-LINC01907 [tissue]
Protein Interaction databases
FunCoupENSG00000226125
BioGRIDLINC01907
STRING (EMBL)LINC01907
ZODIACLINC01907
Ontologies - Pathways
Huge Navigator LINC01907 [HugePedia]
snp3D : Map Gene to Disease151475
BioCentury BCIQLINC01907
ClinGenLINC01907
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD151475
Clinical trialLINC01907
Miscellaneous
canSAR (ICR)LINC01907 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01907
EVEXLINC01907
GoPubMedLINC01907
iHOPLINC01907
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:16 CET 2017

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