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LINC01920 (long intergenic non-protein coding RNA 1920)

Identity

Other alias-
HGNC (Hugo) LINC01920
LocusID (NCBI) 101929260
Atlas_Id 79087
Location 2q23.3  [Link to chromosome band 2q23]
Location_base_pair Starts at 150552532 and ends at 150572221 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01920   52738
Cards
Entrez_Gene (NCBI)LINC01920  101929260  long intergenic non-protein coding RNA 1920
Aliases
GeneCards (Weizmann)LINC01920
Ensembl hg19 (Hinxton)ENSG00000236049 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236049 [Gene_View]  chr2:150552532-150572221 [Contig_View]  LINC01920 [Vega]
ICGC DataPortalENSG00000236049
TCGA cBioPortalLINC01920
AceView (NCBI)LINC01920
Genatlas (Paris)LINC01920
WikiGenes101929260
SOURCE (Princeton)LINC01920
Genetics Home Reference (NIH)LINC01920
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01920  -     chr2:150552532-150572221 -  2q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01920  -     2q23.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01920 - 2q23.3 [CytoView hg19]  LINC01920 - 2q23.3 [CytoView hg38]
Mapping of homologs : NCBILINC01920 [Mapview hg19]  LINC01920 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC014936
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01920
Cluster EST : UnigeneHs.732324 [ NCBI ]
CGAP (NCI)Hs.732324
Alternative Splicing GalleryENSG00000236049
Gene ExpressionLINC01920 [ NCBI-GEO ]   LINC01920 [ EBI - ARRAY_EXPRESS ]   LINC01920 [ SEEK ]   LINC01920 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01920 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929260
GTEX Portal (Tissue expression)LINC01920
Human Protein AtlasENSG00000236049-LINC01920 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01920
DMDM Disease mutations101929260
Blocks (Seattle)LINC01920
Human Protein Atlas [tissue]ENSG00000236049-LINC01920 [tissue]
Protein Interaction databases
FunCoupENSG00000236049
BioGRIDLINC01920
STRING (EMBL)LINC01920
ZODIACLINC01920
Ontologies - Pathways
Huge Navigator LINC01920 [HugePedia]
snp3D : Map Gene to Disease101929260
BioCentury BCIQLINC01920
ClinGenLINC01920
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929260
Clinical trialLINC01920
Miscellaneous
canSAR (ICR)LINC01920 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01920
EVEXLINC01920
GoPubMedLINC01920
iHOPLINC01920
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:16 CET 2017

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