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LINC01921 (long intergenic non-protein coding RNA 1921)

Identity

Other alias-
HGNC (Hugo) LINC01921
LocusID (NCBI) 101928327
Atlas_Id 79142
Location 2q35  [Link to chromosome band 2q35]
Location_base_pair Starts at 216870772 and ends at 216871639 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01921   52740
Cards
Entrez_Gene (NCBI)LINC01921  101928327  long intergenic non-protein coding RNA 1921
Aliases
GeneCards (Weizmann)LINC01921
Ensembl hg19 (Hinxton)ENSG00000223874 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223874 [Gene_View]  chr2:216870772-216871639 [Contig_View]  LINC01921 [Vega]
ICGC DataPortalENSG00000223874
TCGA cBioPortalLINC01921
AceView (NCBI)LINC01921
Genatlas (Paris)LINC01921
WikiGenes101928327
SOURCE (Princeton)LINC01921
Genetics Home Reference (NIH)LINC01921
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01921  -     chr2:216870772-216871639 +  2q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01921  -     2q35   [Description]    (hg19-Feb_2009)
EnsemblLINC01921 - 2q35 [CytoView hg19]  LINC01921 - 2q35 [CytoView hg38]
Mapping of homologs : NCBILINC01921 [Mapview hg19]  LINC01921 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC021184 BC090895 BX098932
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01921
Cluster EST : UnigeneHs.635637 [ NCBI ]
CGAP (NCI)Hs.635637
Alternative Splicing GalleryENSG00000223874
Gene ExpressionLINC01921 [ NCBI-GEO ]   LINC01921 [ EBI - ARRAY_EXPRESS ]   LINC01921 [ SEEK ]   LINC01921 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01921 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928327
GTEX Portal (Tissue expression)LINC01921
Human Protein AtlasENSG00000223874-LINC01921 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01921
DMDM Disease mutations101928327
Blocks (Seattle)LINC01921
Human Protein Atlas [tissue]ENSG00000223874-LINC01921 [tissue]
Protein Interaction databases
FunCoupENSG00000223874
BioGRIDLINC01921
STRING (EMBL)LINC01921
ZODIACLINC01921
Ontologies - Pathways
Huge Navigator LINC01921 [HugePedia]
snp3D : Map Gene to Disease101928327
BioCentury BCIQLINC01921
ClinGenLINC01921
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928327
Clinical trialLINC01921
Miscellaneous
canSAR (ICR)LINC01921 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01921
EVEXLINC01921
GoPubMedLINC01921
iHOPLINC01921
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:17 CET 2017

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