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LINC01923 (long intergenic non-protein coding RNA 1923)

Identity

Other alias-
HGNC (Hugo) LINC01923
LocusID (NCBI) 101927619
Atlas_Id 79989
Location 2q33.1  [Link to chromosome band 2q33]
Location_base_pair Starts at 198299363 and ends at 198375097 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01923   52742
Cards
Entrez_Gene (NCBI)LINC01923  101927619  long intergenic non-protein coding RNA 1923
Aliases
GeneCards (Weizmann)LINC01923
Ensembl hg19 (Hinxton)ENSG00000236653 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236653 [Gene_View]  chr2:198299363-198375097 [Contig_View]  LINC01923 [Vega]
ICGC DataPortalENSG00000236653
TCGA cBioPortalLINC01923
AceView (NCBI)LINC01923
Genatlas (Paris)LINC01923
WikiGenes101927619
SOURCE (Princeton)LINC01923
Genetics Home Reference (NIH)LINC01923
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01923  -     chr2:198299363-198375097 -  2q33.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01923  -     2q33.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01923 - 2q33.1 [CytoView hg19]  LINC01923 - 2q33.1 [CytoView hg38]
Mapping of homologs : NCBILINC01923 [Mapview hg19]  LINC01923 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK096499
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01923
Cluster EST : UnigeneHs.632942 [ NCBI ]
CGAP (NCI)Hs.632942
Alternative Splicing GalleryENSG00000236653
Gene ExpressionLINC01923 [ NCBI-GEO ]   LINC01923 [ EBI - ARRAY_EXPRESS ]   LINC01923 [ SEEK ]   LINC01923 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01923 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927619
GTEX Portal (Tissue expression)LINC01923
Human Protein AtlasENSG00000236653-LINC01923 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01923
DMDM Disease mutations101927619
Blocks (Seattle)LINC01923
Human Protein Atlas [tissue]ENSG00000236653-LINC01923 [tissue]
Protein Interaction databases
FunCoupENSG00000236653
BioGRIDLINC01923
STRING (EMBL)LINC01923
ZODIACLINC01923
Ontologies - Pathways
Huge Navigator LINC01923 [HugePedia]
snp3D : Map Gene to Disease101927619
BioCentury BCIQLINC01923
ClinGenLINC01923
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927619
Clinical trialLINC01923
Miscellaneous
canSAR (ICR)LINC01923 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01923
EVEXLINC01923
GoPubMedLINC01923
iHOPLINC01923
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:17 CET 2017

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