Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01932 (long intergenic non-protein coding RNA 1932)

Identity

Other alias-
HGNC (Hugo) LINC01932
LocusID (NCBI) 105377682
Atlas_Id 78908
Location 5q33.3  [Link to chromosome band 5q33]
Location_base_pair Starts at 159227715 and ends at 159245127 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01932   52755
Cards
Entrez_Gene (NCBI)LINC01932  105377682  long intergenic non-protein coding RNA 1932
Aliases
GeneCards (Weizmann)LINC01932
Ensembl hg19 (Hinxton)ENSG00000253315 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000253315 [Gene_View]  ENSG00000253315 [Sequence]  chr5:159227715-159245127 [Contig_View]  LINC01932 [Vega]
ICGC DataPortalENSG00000253315
TCGA cBioPortalLINC01932
AceView (NCBI)LINC01932
Genatlas (Paris)LINC01932
WikiGenes105377682
SOURCE (Princeton)LINC01932
Genetics Home Reference (NIH)LINC01932
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01932  -     chr5:159227715-159245127 +  5q33.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01932  -     5q33.3   [Description]    (hg19-Feb_2009)
LINC01932 - 5q33.3 [CytoView hg19]  LINC01932 - 5q33.3 [CytoView hg38]
Mapping of homologs : NCBILINC01932 [Mapview hg19]  LINC01932 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB198778
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01932
Alternative Splicing GalleryENSG00000253315
Gene ExpressionLINC01932 [ NCBI-GEO ]   LINC01932 [ EBI - ARRAY_EXPRESS ]   LINC01932 [ SEEK ]   LINC01932 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01932 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105377682
GTEX Portal (Tissue expression)LINC01932
Human Protein AtlasENSG00000253315-LINC01932 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01932
DMDM Disease mutations105377682
Blocks (Seattle)LINC01932
Human Protein Atlas [tissue]ENSG00000253315-LINC01932 [tissue]
Protein Interaction databases
FunCoupENSG00000253315
BioGRIDLINC01932
STRING (EMBL)LINC01932
ZODIACLINC01932
Ontologies - Pathways
Huge Navigator LINC01932 [HugePedia]
snp3D : Map Gene to Disease105377682
BioCentury BCIQLINC01932
ClinGenLINC01932
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105377682
Clinical trialLINC01932
Miscellaneous
canSAR (ICR)LINC01932 (select the gene name)
DataMed IndexLINC01932
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01932
EVEXLINC01932
GoPubMedLINC01932
iHOPLINC01932
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Apr 30 13:35:27 CEST 2019

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.