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LINC01935 (long intergenic non-protein coding RNA 1935)

Identity

Other alias-
HGNC (Hugo) LINC01935
LocusID (NCBI) 105373519
Atlas_Id 80136
Location 2q12.1  [Link to chromosome band 2q12]
Location_base_pair Starts at 102967409 and ends at 102984429 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01935   52758
Cards
Entrez_Gene (NCBI)LINC01935  105373519  long intergenic non-protein coding RNA 1935
Aliases
GeneCards (Weizmann)LINC01935
Ensembl hg19 (Hinxton)ENSG00000224095 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000224095 [Gene_View]  chr2:102967409-102984429 [Contig_View]  LINC01935 [Vega]
ICGC DataPortalENSG00000224095
TCGA cBioPortalLINC01935
AceView (NCBI)LINC01935
Genatlas (Paris)LINC01935
WikiGenes105373519
SOURCE (Princeton)LINC01935
Genetics Home Reference (NIH)LINC01935
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01935  -     chr2:102967409-102984429 -  2q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01935  -     2q12.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01935 - 2q12.1 [CytoView hg19]  LINC01935 - 2q12.1 [CytoView hg38]
Mapping of homologs : NCBILINC01935 [Mapview hg19]  LINC01935 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01935
Alternative Splicing GalleryENSG00000224095
Gene ExpressionLINC01935 [ NCBI-GEO ]   LINC01935 [ EBI - ARRAY_EXPRESS ]   LINC01935 [ SEEK ]   LINC01935 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01935 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105373519
GTEX Portal (Tissue expression)LINC01935
Human Protein AtlasENSG00000224095-LINC01935 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01935
DMDM Disease mutations105373519
Blocks (Seattle)LINC01935
Human Protein Atlas [tissue]ENSG00000224095-LINC01935 [tissue]
Protein Interaction databases
FunCoupENSG00000224095
BioGRIDLINC01935
STRING (EMBL)LINC01935
ZODIACLINC01935
Ontologies - Pathways
Huge Navigator LINC01935 [HugePedia]
snp3D : Map Gene to Disease105373519
BioCentury BCIQLINC01935
ClinGenLINC01935
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105373519
Clinical trialLINC01935
Miscellaneous
canSAR (ICR)LINC01935 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01935
EVEXLINC01935
GoPubMedLINC01935
iHOPLINC01935
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:40:35 CET 2017

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