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LINC01941 (long intergenic non-protein coding RNA 1941)

Identity

Other alias-
HGNC (Hugo) LINC01941
LocusID (NCBI) 105373600
Atlas_Id 79236
Location 2q14.3  [Link to chromosome band 2q14]
Location_base_pair Starts at 126110100 and ends at 126117985 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01941   52764
Cards
Entrez_Gene (NCBI)LINC01941  105373600  long intergenic non-protein coding RNA 1941
Aliases
GeneCards (Weizmann)LINC01941
Ensembl hg19 (Hinxton)ENSG00000226813 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226813 [Gene_View]  chr2:126110100-126117985 [Contig_View]  LINC01941 [Vega]
ICGC DataPortalENSG00000226813
TCGA cBioPortalLINC01941
AceView (NCBI)LINC01941
Genatlas (Paris)LINC01941
WikiGenes105373600
SOURCE (Princeton)LINC01941
Genetics Home Reference (NIH)LINC01941
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01941  -     chr2:126110100-126117985 -  2q14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01941  -     2q14.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01941 - 2q14.3 [CytoView hg19]  LINC01941 - 2q14.3 [CytoView hg38]
Mapping of homologs : NCBILINC01941 [Mapview hg19]  LINC01941 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CR744069
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01941
Cluster EST : UnigeneHs.555059 [ NCBI ]
CGAP (NCI)Hs.555059
Alternative Splicing GalleryENSG00000226813
Gene ExpressionLINC01941 [ NCBI-GEO ]   LINC01941 [ EBI - ARRAY_EXPRESS ]   LINC01941 [ SEEK ]   LINC01941 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01941 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105373600
GTEX Portal (Tissue expression)LINC01941
Human Protein AtlasENSG00000226813-LINC01941 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01941
DMDM Disease mutations105373600
Blocks (Seattle)LINC01941
Human Protein Atlas [tissue]ENSG00000226813-LINC01941 [tissue]
Protein Interaction databases
FunCoupENSG00000226813
BioGRIDLINC01941
STRING (EMBL)LINC01941
ZODIACLINC01941
Ontologies - Pathways
Huge Navigator LINC01941 [HugePedia]
snp3D : Map Gene to Disease105373600
BioCentury BCIQLINC01941
ClinGenLINC01941
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105373600
Clinical trialLINC01941
Miscellaneous
canSAR (ICR)LINC01941 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01941
EVEXLINC01941
GoPubMedLINC01941
iHOPLINC01941
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:40:35 CET 2017

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