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LINC01951 (long intergenic non-protein coding RNA 1951)

Identity

Other alias-
HGNC (Hugo) LINC01951
LocusID (NCBI) 441116
Atlas_Id 79022
Location 5q35.2  [Link to chromosome band 5q35]
Location_base_pair Starts at 174919082 and ends at 174995731 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01951   52774
Cards
Entrez_Gene (NCBI)LINC01951  441116  long intergenic non-protein coding RNA 1951
Aliases
GeneCards (Weizmann)LINC01951
Ensembl hg19 (Hinxton)ENSG00000204754 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204754 [Gene_View]  ENSG00000204754 [Sequence]  chr5:174919082-174995731 [Contig_View]  LINC01951 [Vega]
ICGC DataPortalENSG00000204754
TCGA cBioPortalLINC01951
AceView (NCBI)LINC01951
Genatlas (Paris)LINC01951
WikiGenes441116
SOURCE (Princeton)LINC01951
Genetics Home Reference (NIH)LINC01951
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01951  -     chr5:174919082-174995731 -  5q35.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01951  -     5q35.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01951 - 5q35.2 [CytoView hg19]  LINC01951 - 5q35.2 [CytoView hg38]
Mapping of homologs : NCBILINC01951 [Mapview hg19]  LINC01951 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK131247
RefSeq transcript (Entrez)NM_001004348
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01951
Cluster EST : UnigeneHs.533036 [ NCBI ]
CGAP (NCI)Hs.533036
Alternative Splicing GalleryENSG00000204754
Gene ExpressionLINC01951 [ NCBI-GEO ]   LINC01951 [ EBI - ARRAY_EXPRESS ]   LINC01951 [ SEEK ]   LINC01951 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01951 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)441116
GTEX Portal (Tissue expression)LINC01951
Human Protein AtlasENSG00000204754-LINC01951 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01951
DMDM Disease mutations441116
Blocks (Seattle)LINC01951
Human Protein Atlas [tissue]ENSG00000204754-LINC01951 [tissue]
Protein Interaction databases
FunCoupENSG00000204754
BioGRIDLINC01951
STRING (EMBL)LINC01951
ZODIACLINC01951
Ontologies - Pathways
Huge Navigator LINC01951 [HugePedia]
snp3D : Map Gene to Disease441116
BioCentury BCIQLINC01951
ClinGenLINC01951
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD441116
Clinical trialLINC01951
Miscellaneous
canSAR (ICR)LINC01951 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01951
EVEXLINC01951
GoPubMedLINC01951
iHOPLINC01951
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:56:30 CEST 2018

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