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LINC01963 (long intergenic non-protein coding RNA 1963)

Identity

Alias_symbol (synonym)DKFZp434H1419
Other aliasPKI55
HGNC (Hugo) LINC01963
LocusID (NCBI) 150967
Atlas_Id 78914
Location 2q35  [Link to chromosome band 2q35]
Location_base_pair Starts at 216217045 and ends at 216220190 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01963   25283
Cards
Entrez_Gene (NCBI)LINC01963  150967  long intergenic non-protein coding RNA 1963
AliasesPKI55
GeneCards (Weizmann)LINC01963
Ensembl hg19 (Hinxton)ENSG00000260804 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260804 [Gene_View]  chr2:216217045-216220190 [Contig_View]  LINC01963 [Vega]
ICGC DataPortalENSG00000260804
TCGA cBioPortalLINC01963
AceView (NCBI)LINC01963
Genatlas (Paris)LINC01963
WikiGenes150967
SOURCE (Princeton)LINC01963
Genetics Home Reference (NIH)LINC01963
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01963  -     chr2:216217045-216220190 +  2q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01963  -     2q35   [Description]    (hg19-Feb_2009)
EnsemblLINC01963 - 2q35 [CytoView hg19]  LINC01963 - 2q35 [CytoView hg38]
Mapping of homologs : NCBILINC01963 [Mapview hg19]  LINC01963 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK125369 AL137534 CX783064 DA113272
RefSeq transcript (Entrez)NM_001199924
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01963
Cluster EST : UnigeneHs.56876 [ NCBI ]
CGAP (NCI)Hs.56876
Alternative Splicing GalleryENSG00000260804
Gene ExpressionLINC01963 [ NCBI-GEO ]   LINC01963 [ EBI - ARRAY_EXPRESS ]   LINC01963 [ SEEK ]   LINC01963 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01963 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)150967
GTEX Portal (Tissue expression)LINC01963
Human Protein AtlasENSG00000260804-LINC01963 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01963
DMDM Disease mutations150967
Blocks (Seattle)LINC01963
Human Protein Atlas [tissue]ENSG00000260804-LINC01963 [tissue]
IPIIPI00975728   IPI00783067   
Protein Interaction databases
FunCoupENSG00000260804
BioGRIDLINC01963
STRING (EMBL)LINC01963
ZODIACLINC01963
Ontologies - Pathways
Huge Navigator LINC01963 [HugePedia]
snp3D : Map Gene to Disease150967
BioCentury BCIQLINC01963
ClinGenLINC01963
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD150967
Clinical trialLINC01963
Miscellaneous
canSAR (ICR)LINC01963 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01963
EVEXLINC01963
GoPubMedLINC01963
iHOPLINC01963
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:19 CET 2017

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