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LINC01964 (long intergenic non-protein coding RNA 1964)

Identity

Other alias-
HGNC (Hugo) LINC01964
LocusID (NCBI) 100996478
Atlas_Id 80083
Location 2p11.2  [Link to chromosome band 2p11]
Location_base_pair Starts at 85064110 and ends at 85067347 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01964   52789
Cards
Entrez_Gene (NCBI)LINC01964  100996478  long intergenic non-protein coding RNA 1964
Aliases
GeneCards (Weizmann)LINC01964
Ensembl hg19 (Hinxton)ENSG00000260840 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260840 [Gene_View]  chr2:85064110-85067347 [Contig_View]  LINC01964 [Vega]
ICGC DataPortalENSG00000260840
TCGA cBioPortalLINC01964
AceView (NCBI)LINC01964
Genatlas (Paris)LINC01964
WikiGenes100996478
SOURCE (Princeton)LINC01964
Genetics Home Reference (NIH)LINC01964
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01964  -     chr2:85064110-85067347 -  2p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01964  -     2p11.2   [Description]    (hg19-Feb_2009)
EnsemblLINC01964 - 2p11.2 [CytoView hg19]  LINC01964 - 2p11.2 [CytoView hg38]
Mapping of homologs : NCBILINC01964 [Mapview hg19]  LINC01964 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC044795
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01964
Cluster EST : UnigeneHs.434398 [ NCBI ]
CGAP (NCI)Hs.434398
Alternative Splicing GalleryENSG00000260840
Gene ExpressionLINC01964 [ NCBI-GEO ]   LINC01964 [ EBI - ARRAY_EXPRESS ]   LINC01964 [ SEEK ]   LINC01964 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01964 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100996478
GTEX Portal (Tissue expression)LINC01964
Human Protein AtlasENSG00000260840-LINC01964 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01964
DMDM Disease mutations100996478
Blocks (Seattle)LINC01964
Human Protein Atlas [tissue]ENSG00000260840-LINC01964 [tissue]
Protein Interaction databases
FunCoupENSG00000260840
BioGRIDLINC01964
STRING (EMBL)LINC01964
ZODIACLINC01964
Ontologies - Pathways
Huge Navigator LINC01964 [HugePedia]
snp3D : Map Gene to Disease100996478
BioCentury BCIQLINC01964
ClinGenLINC01964
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100996478
Clinical trialLINC01964
Miscellaneous
canSAR (ICR)LINC01964 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01964
EVEXLINC01964
GoPubMedLINC01964
iHOPLINC01964
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:20 CET 2017

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