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LINC01968 (long intergenic non-protein coding RNA 1968)

Identity

Other alias-
HGNC (Hugo) LINC01968
LocusID (NCBI) 100507391
Atlas_Id 79956
Location 3q29  [Link to chromosome band 3q29]
Location_base_pair Starts at 194708421 and ends at 194782168 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01968   52794
Cards
Entrez_Gene (NCBI)LINC01968  100507391  long intergenic non-protein coding RNA 1968
Aliases
GeneCards (Weizmann)LINC01968
Ensembl hg19 (Hinxton)ENSG00000237222 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237222 [Gene_View]  ENSG00000237222 [Sequence]  chr3:194708421-194782168 [Contig_View]  LINC01968 [Vega]
ICGC DataPortalENSG00000237222
TCGA cBioPortalLINC01968
AceView (NCBI)LINC01968
Genatlas (Paris)LINC01968
WikiGenes100507391
SOURCE (Princeton)LINC01968
Genetics Home Reference (NIH)LINC01968
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01968  -     chr3:194708421-194782168 +  3q29   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01968  -     3q29   [Description]    (hg19-Feb_2009)
EnsemblLINC01968 - 3q29 [CytoView hg19]  LINC01968 - 3q29 [CytoView hg38]
Mapping of homologs : NCBILINC01968 [Mapview hg19]  LINC01968 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC042533
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01968
Cluster EST : UnigeneHs.590099 [ NCBI ]
CGAP (NCI)Hs.590099
Alternative Splicing GalleryENSG00000237222
Gene ExpressionLINC01968 [ NCBI-GEO ]   LINC01968 [ EBI - ARRAY_EXPRESS ]   LINC01968 [ SEEK ]   LINC01968 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01968 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507391
GTEX Portal (Tissue expression)LINC01968
Human Protein AtlasENSG00000237222-LINC01968 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01968
DMDM Disease mutations100507391
Blocks (Seattle)LINC01968
Human Protein Atlas [tissue]ENSG00000237222-LINC01968 [tissue]
Protein Interaction databases
FunCoupENSG00000237222
BioGRIDLINC01968
STRING (EMBL)LINC01968
ZODIACLINC01968
Ontologies - Pathways
Huge Navigator LINC01968 [HugePedia]
snp3D : Map Gene to Disease100507391
BioCentury BCIQLINC01968
ClinGenLINC01968
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507391
Clinical trialLINC01968
Miscellaneous
canSAR (ICR)LINC01968 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01968
EVEXLINC01968
GoPubMedLINC01968
iHOPLINC01968
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:56:33 CEST 2018

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