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LINC01976 (long intergenic non-protein coding RNA 1976)

Identity

Other alias-
HGNC (Hugo) LINC01976
LocusID (NCBI) 107546764
Atlas_Id 80195
Location 17q21.31  [Link to chromosome band 17q21]
Location_base_pair Starts at 43938261 and ends at 43938962 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01976   52803
Cards
Entrez_Gene (NCBI)LINC01976  107546764  long intergenic non-protein coding RNA 1976
Aliases
GeneCards (Weizmann)LINC01976
Ensembl hg19 (Hinxton)ENSG00000261514 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000261514 [Gene_View]  chr17:43938261-43938962 [Contig_View]  LINC01976 [Vega]
ICGC DataPortalENSG00000261514
TCGA cBioPortalLINC01976
AceView (NCBI)LINC01976
Genatlas (Paris)LINC01976
WikiGenes107546764
SOURCE (Princeton)LINC01976
Genetics Home Reference (NIH)LINC01976
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01976  -     chr17:43938261-43938962 +  17q21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01976  -     17q21.31   [Description]    (hg19-Feb_2009)
EnsemblLINC01976 - 17q21.31 [CytoView hg19]  LINC01976 - 17q21.31 [CytoView hg38]
Mapping of homologs : NCBILINC01976 [Mapview hg19]  LINC01976 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX097691 HY038933 HY224780
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01976
Cluster EST : UnigeneHs.144950 [ NCBI ]
CGAP (NCI)Hs.144950
Alternative Splicing GalleryENSG00000261514
Gene ExpressionLINC01976 [ NCBI-GEO ]   LINC01976 [ EBI - ARRAY_EXPRESS ]   LINC01976 [ SEEK ]   LINC01976 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01976 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)107546764
GTEX Portal (Tissue expression)LINC01976
Human Protein AtlasENSG00000261514-LINC01976 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01976
DMDM Disease mutations107546764
Blocks (Seattle)LINC01976
Human Protein Atlas [tissue]ENSG00000261514-LINC01976 [tissue]
Protein Interaction databases
FunCoupENSG00000261514
BioGRIDLINC01976
STRING (EMBL)LINC01976
ZODIACLINC01976
Ontologies - Pathways
Huge Navigator LINC01976 [HugePedia]
snp3D : Map Gene to Disease107546764
BioCentury BCIQLINC01976
ClinGenLINC01976
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD107546764
Clinical trialLINC01976
Miscellaneous
canSAR (ICR)LINC01976 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01976
EVEXLINC01976
GoPubMedLINC01976
iHOPLINC01976
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:35:49 CET 2017

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