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LINC01981 (long intergenic non-protein coding RNA 1981)

Identity

Other alias-
HGNC (Hugo) LINC01981
LocusID (NCBI) 100996624
Atlas_Id 79584
Location 3p24.1  [Link to chromosome band 3p24]
Location_base_pair Starts at 27830886 and ends at 27834136 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01981   52809
Cards
Entrez_Gene (NCBI)LINC01981  100996624  long intergenic non-protein coding RNA 1981
Aliases
GeneCards (Weizmann)LINC01981
Ensembl hg19 (Hinxton)ENSG00000229243 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229243 [Gene_View]  ENSG00000229243 [Sequence]  chr3:27830886-27834136 [Contig_View]  LINC01981 [Vega]
ICGC DataPortalENSG00000229243
TCGA cBioPortalLINC01981
AceView (NCBI)LINC01981
Genatlas (Paris)LINC01981
WikiGenes100996624
SOURCE (Princeton)LINC01981
Genetics Home Reference (NIH)LINC01981
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01981  -     chr3:27830886-27834136 -  3p24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01981  -     3p24.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01981 - 3p24.1 [CytoView hg19]  LINC01981 - 3p24.1 [CytoView hg38]
Mapping of homologs : NCBILINC01981 [Mapview hg19]  LINC01981 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA719043 BC037254 BC045661 BC047650 BG722271
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01981
Cluster EST : UnigeneHs.275746 [ NCBI ]
CGAP (NCI)Hs.275746
Alternative Splicing GalleryENSG00000229243
Gene ExpressionLINC01981 [ NCBI-GEO ]   LINC01981 [ EBI - ARRAY_EXPRESS ]   LINC01981 [ SEEK ]   LINC01981 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01981 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100996624
GTEX Portal (Tissue expression)LINC01981
Human Protein AtlasENSG00000229243-LINC01981 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01981
DMDM Disease mutations100996624
Blocks (Seattle)LINC01981
Human Protein Atlas [tissue]ENSG00000229243-LINC01981 [tissue]
Protein Interaction databases
FunCoupENSG00000229243
BioGRIDLINC01981
STRING (EMBL)LINC01981
ZODIACLINC01981
Ontologies - Pathways
Huge Navigator LINC01981 [HugePedia]
snp3D : Map Gene to Disease100996624
BioCentury BCIQLINC01981
ClinGenLINC01981
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100996624
Clinical trialLINC01981
Miscellaneous
canSAR (ICR)LINC01981 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01981
EVEXLINC01981
GoPubMedLINC01981
iHOPLINC01981
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:56:35 CEST 2018

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