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LINC01983 (long intergenic non-protein coding RNA 1983)

Identity

Other alias-
HGNC (Hugo) LINC01983
LocusID (NCBI) 101929697
Atlas_Id 79003
Location 3q29  [Link to chromosome band 3q29]
Location_base_pair Starts at 195836455 and ends at 195860404 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01983   52813
Cards
Entrez_Gene (NCBI)LINC01983  101929697  long intergenic non-protein coding RNA 1983
Aliases
GeneCards (Weizmann)LINC01983
Ensembl hg19 (Hinxton)ENSG00000223783 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223783 [Gene_View]  ENSG00000223783 [Sequence]  chr3:195836455-195860404 [Contig_View]  LINC01983 [Vega]
ICGC DataPortalENSG00000223783
TCGA cBioPortalLINC01983
AceView (NCBI)LINC01983
Genatlas (Paris)LINC01983
WikiGenes101929697
SOURCE (Princeton)LINC01983
Genetics Home Reference (NIH)LINC01983
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01983  -     chr3:195836455-195860404 -  3q29   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01983  -     3q29   [Description]    (hg19-Feb_2009)
EnsemblLINC01983 - 3q29 [CytoView hg19]  LINC01983 - 3q29 [CytoView hg38]
Mapping of homologs : NCBILINC01983 [Mapview hg19]  LINC01983 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI799807 BI042007 DA288418
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01983
Cluster EST : UnigeneHs.551750 [ NCBI ]
CGAP (NCI)Hs.551750
Alternative Splicing GalleryENSG00000223783
Gene ExpressionLINC01983 [ NCBI-GEO ]   LINC01983 [ EBI - ARRAY_EXPRESS ]   LINC01983 [ SEEK ]   LINC01983 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01983 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929697
GTEX Portal (Tissue expression)LINC01983
Human Protein AtlasENSG00000223783-LINC01983 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01983
DMDM Disease mutations101929697
Blocks (Seattle)LINC01983
Human Protein Atlas [tissue]ENSG00000223783-LINC01983 [tissue]
Protein Interaction databases
FunCoupENSG00000223783
BioGRIDLINC01983
STRING (EMBL)LINC01983
ZODIACLINC01983
Ontologies - Pathways
Huge Navigator LINC01983 [HugePedia]
snp3D : Map Gene to Disease101929697
BioCentury BCIQLINC01983
ClinGenLINC01983
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929697
Clinical trialLINC01983
Miscellaneous
canSAR (ICR)LINC01983 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01983
EVEXLINC01983
GoPubMedLINC01983
iHOPLINC01983
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:56:35 CEST 2018

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