Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC01985 (long intergenic non-protein coding RNA 1985)

Identity

Other alias-
HGNC (Hugo) LINC01985
LocusID (NCBI) 101928015
Atlas_Id 79758
Location 3p24.1  [Link to chromosome band 3p24]
Location_base_pair Starts at 30518868 and ends at 30527193 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC01985   52816
Cards
Entrez_Gene (NCBI)LINC01985  101928015  long intergenic non-protein coding RNA 1985
Aliases
GeneCards (Weizmann)LINC01985
Ensembl hg19 (Hinxton)ENSG00000227260 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227260 [Gene_View]  ENSG00000227260 [Sequence]  chr3:30518868-30527193 [Contig_View]  LINC01985 [Vega]
ICGC DataPortalENSG00000227260
TCGA cBioPortalLINC01985
AceView (NCBI)LINC01985
Genatlas (Paris)LINC01985
WikiGenes101928015
SOURCE (Princeton)LINC01985
Genetics Home Reference (NIH)LINC01985
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01985  -     chr3:30518868-30527193 +  3p24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01985  -     3p24.1   [Description]    (hg19-Feb_2009)
EnsemblLINC01985 - 3p24.1 [CytoView hg19]  LINC01985 - 3p24.1 [CytoView hg38]
Mapping of homologs : NCBILINC01985 [Mapview hg19]  LINC01985 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI652191
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01985
Cluster EST : UnigeneHs.581534 [ NCBI ]
CGAP (NCI)Hs.581534
Alternative Splicing GalleryENSG00000227260
Gene ExpressionLINC01985 [ NCBI-GEO ]   LINC01985 [ EBI - ARRAY_EXPRESS ]   LINC01985 [ SEEK ]   LINC01985 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01985 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928015
GTEX Portal (Tissue expression)LINC01985
Human Protein AtlasENSG00000227260-LINC01985 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01985
DMDM Disease mutations101928015
Blocks (Seattle)LINC01985
Human Protein Atlas [tissue]ENSG00000227260-LINC01985 [tissue]
Protein Interaction databases
FunCoupENSG00000227260
BioGRIDLINC01985
STRING (EMBL)LINC01985
ZODIACLINC01985
Ontologies - Pathways
Huge Navigator LINC01985 [HugePedia]
snp3D : Map Gene to Disease101928015
BioCentury BCIQLINC01985
ClinGenLINC01985
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928015
Clinical trialLINC01985
Miscellaneous
canSAR (ICR)LINC01985 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01985
EVEXLINC01985
GoPubMedLINC01985
iHOPLINC01985
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:56:36 CEST 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.