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LINC01986 (long intergenic non-protein coding RNA 1986)

Identity

Other alias-
HGNC (Hugo) LINC01986
LocusID (NCBI) 102723448
Atlas_Id 80094
Location 3p26.3  [Link to chromosome band 3p26]
Location_base_pair Starts at 11751 and ends at 24501 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC01986   52817
Cards
Entrez_Gene (NCBI)LINC01986  102723448  long intergenic non-protein coding RNA 1986
Aliases
GeneCards (Weizmann)LINC01986
Ensembl hg19 (Hinxton)ENSG00000223587 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223587 [Gene_View]  ENSG00000223587 [Sequence]  chr3:11751-24501 [Contig_View]  LINC01986 [Vega]
ICGC DataPortalENSG00000223587
TCGA cBioPortalLINC01986
AceView (NCBI)LINC01986
Genatlas (Paris)LINC01986
WikiGenes102723448
SOURCE (Princeton)LINC01986
Genetics Home Reference (NIH)LINC01986
Genomic and cartography
GoldenPath hg38 (UCSC)LINC01986  -     chr3:11751-24501 +  3p26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC01986  -     3p26.3   [Description]    (hg19-Feb_2009)
EnsemblLINC01986 - 3p26.3 [CytoView hg19]  LINC01986 - 3p26.3 [CytoView hg38]
Mapping of homologs : NCBILINC01986 [Mapview hg19]  LINC01986 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC039672
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC01986
Cluster EST : UnigeneHs.543290 [ NCBI ]
CGAP (NCI)Hs.543290
Alternative Splicing GalleryENSG00000223587
Gene ExpressionLINC01986 [ NCBI-GEO ]   LINC01986 [ EBI - ARRAY_EXPRESS ]   LINC01986 [ SEEK ]   LINC01986 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC01986 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102723448
GTEX Portal (Tissue expression)LINC01986
Human Protein AtlasENSG00000223587-LINC01986 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC01986
DMDM Disease mutations102723448
Blocks (Seattle)LINC01986
Human Protein Atlas [tissue]ENSG00000223587-LINC01986 [tissue]
Protein Interaction databases
FunCoupENSG00000223587
BioGRIDLINC01986
STRING (EMBL)LINC01986
ZODIACLINC01986
Ontologies - Pathways
Huge Navigator LINC01986 [HugePedia]
snp3D : Map Gene to Disease102723448
BioCentury BCIQLINC01986
ClinGenLINC01986
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102723448
Clinical trialLINC01986
Miscellaneous
canSAR (ICR)LINC01986 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC01986
EVEXLINC01986
GoPubMedLINC01986
iHOPLINC01986
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:56:36 CEST 2018

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